C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIE, polypeptide 2, beta 34kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355904 GTF2E2-001 ENSG00000197265 9606 - 8:30578318-30658251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355904 1.614±0.00 1.768±0.00 0.865±0.00 3.500±0.67 4.101±1.27 3.220±1.19 0.981±0.46 2.265±0.66 2.302±0.14 4.020±0.90 0.724±0.04 6.344±5.32 3.783±1.00 8.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393
CIL_0008IH CIL_0008IH_0001 VISTA 8:30111104-30714589
CIL_0004EE CIL_0004EE_0001 CGP 8:30578318-30658251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005673 IEA transcription factor TFIIE complex
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 IEA:TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170705 Gtf2e2-001 protein_coding Mus_musculus 0 1216
ENSMUST00000171010 Gtf2e2-201 protein_coding Mus_musculus 0 1214
ENSMUST00000167264 Gtf2e2-002 protein_coding Mus_musculus 0 1214
ENSMUST00000186200 Gtf2e2-006 processed_transcript Mus_musculus 0 414

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