C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L37a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197756 RPL37A 9606 + 2:216498189-216579180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359681 RPL37A-005 216498867-216501467 retained_intron
  ENST00000420712 RPL37A-006 216498862-216501462 nonsense_mediated_decay
  ENST00000427280 RPL37A-010 216499086-216529451 protein_coding
  ENST00000441179 RPL37A-013 216499140-216529484 protein_coding
  ENST00000446558 RPL37A-008 216498855-216579180 protein_coding
  ENST00000456586 RPL37A-007 216499086-216501463 protein_coding
  ENST00000478153 RPL37A-004 216498825-216501456 retained_intron
  ENST00000487233 RPL37A-002 216498844-216501460 retained_intron
  ENST00000490649 RPL37A-003 216498825-216501467 retained_intron
  ENST00000491306 RPL37A-001 216498189-216504086 protein_coding
  ENST00000598925 RPL37A-009 216499086-216529587 protein_coding
  ENST00000600880 RPL37A-011 216498850-216529454 protein_coding
  ENST00000624436 RPL37A-014 216529025-216529583 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420712ENST00000456586ENST00000491306ENST00000600880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420712 1039.010±0.00 1419.490±0.00 N/A 232.604±0.00 1207.690±0.00 1220.660±0.00 109.158±0.00 232.307±0.00 114.853±0.00 334.727±0.00 407.924±0.00 1255.576±618.67 277.604±0.00 891.578±0.00
ENST00000456586 253.465±0.00 234.630±0.00 89.996±0.00 278.990±21.74 341.870±0.00 457.459±62.06 336.927±163.30 436.430±197.39 466.615±81.98 779.506±504.06 1186.925±632.65 1554.257±1298.11 1194.948±619.31 258.432±82.31
ENST00000491306 N/A N/A 4.642±0.00 6.006±1.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600880 N/A N/A N/A 73.544±0.00 69.981±0.00 N/A 39.454±0.00 42.489±0.00 85.489±0.00 68.149±0.00 66.605±0.00 152.974±51.12 180.273±0.00 109.742±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MF CIL_0005MF_0001 CGP 2:216498189-216664436

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042389 RPL37A ribosomal protein L37a protein_coding Danio_rerio
ENSMUSG00000046330 Rpl37a ribosomal protein L37a protein_coding Mus_musculus

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