C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L37a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456586 RPL37A-007 ENSG00000197756 9606 + 2:216499086-216501463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456586 253.465±0.00 234.630±0.00 89.996±0.00 278.990±21.74 341.870±0.00 457.459±62.06 336.927±163.30 436.430±197.39 466.615±81.98 779.506±504.06 1186.925±632.65 1554.257±1298.11 1194.948±619.31 258.432±82.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MF CIL_0005MF_0001 CGP 2:216498189-216664436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059980 Rpl37a-201 protein_coding Mus_musculus 0 385
ENSMUST00000099371 Gm4149-201 pseudogene Mus_musculus 0 377
ENSMUST00000117690 Gm14173-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000165488 Gm4613-201 processed_pseudogene Mus_musculus 0 344
ENSMUST00000122133 Gm14251-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000080671 RP24-511K23.2-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000120162 Gm13875-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000118443 Gm11285-001 unprocessed_pseudogene Mus_musculus 0 283
ENSMUST00000119187 Gm16106-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000118308 Gm13879-001 processed_pseudogene Mus_musculus 0 226

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