C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 4 open reading frame 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197826 C4orf22 9606 + 4:80335720-80963756 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358105 C4orf22-001 80335720-80963756 protein_coding
  ENST00000502497 C4orf22-006 80335743-80790507 processed_transcript
  ENST00000503883 C4orf22-007 80335781-80583291 processed_transcript
  ENST00000508314 C4orf22-008 80870049-80963697 processed_transcript
  ENST00000508675 C4orf22-003 80335769-80963612 protein_coding
  ENST00000512931 C4orf22-005 80335742-80649150 processed_transcript
  ENST00000513920 C4orf22-002 80335768-80873074 nonsense_mediated_decay
  ENST00000514249 C4orf22-004 80335742-80649206 nonsense_mediated_decay
  ENST00000621014 C4orf22-201 80944808-80963612 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000358105ENST00000502497ENST00000503883ENST00000508675ENST00000512931ENST00000513920
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000358105 N/A N/A 0.206±0.00 0.281±0.00 N/A N/A N/A 1.651±0.29 1.518±1.27 0.045±0.00 13.826±4.51
ENST00000502497 N/A N/A N/A 0.845±0.00 0.437±0.00 N/A N/A 2.264±0.00 N/A N/A 45.585±0.00
ENST00000503883 N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A
ENST00000508675 N/A N/A N/A N/A N/A N/A N/A 1.182±0.00 1.293±0.00 N/A 6.635±1.93
ENST00000512931 N/A N/A N/A 0.399±0.00 0.092±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513920 0.024±0.00 0.050±0.00 0.046±0.00 0.082±0.04 0.012±0.00 0.060±0.00 0.016±0.00 N/A 0.019±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069V CIL_00069V_0001 CGP 4:80183879-80336680
CIL_0001VN CIL_0001VN_0002 CGP 4:80266599-80963756
CIL_0005UO CIL_0005UO_0002 CGP 4:80335720-81057531

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088753 C5H4orf22 chromosome 4 open reading frame 22 protein_coding Danio_rerio
ENSMUSG00000057816 1700007G11Rik RIKEN cDNA 1700007G11 gene protein_coding Mus_musculus

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