C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 49, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197872 FAM49A 9606 - 2:16549459-16666331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381323 FAM49A-001 16549459-16665834 protein_coding
  ENST00000406434 FAM49A-002 16552936-16665828 protein_coding
  ENST00000445605 FAM49A-003 16564005-16666086 protein_coding
  ENST00000451689 FAM49A-004 16564024-16666331 protein_coding
  ENST00000469507 FAM49A-005 16560657-16561482 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381323ENST00000406434ENST00000445605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381323 8.357±0.00 4.386±0.00 0.254±0.00 14.182±4.62 3.859±0.00 3.188±2.27 0.964±0.00 0.696±0.00 1.019±0.21 3.851±0.00 5.312±0.00 3.009±0.13 5.791±0.35 1.151±0.89
ENST00000406434 N/A N/A 0.229±0.00 N/A N/A N/A N/A N/A N/A 6.001±0.00 N/A 0.298±0.00 3.033±0.00 0.389±0.00
ENST00000445605 N/A N/A N/A N/A 4.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094N CIL_00094N_0001 VISTA 2:16454785-17055066

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IDA intracellular

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006672 znf395 zinc finger protein 395 protein_coding Danio_rerio
ENSDARG00000068889 znf395 zinc finger protein 395 protein_coding Danio_rerio
ENSMUSG00000020589 Fam49a family with sequence similarity 49, member A protein_coding Mus_musculus

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