C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00094N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm103 VISTA 9606 2:16454785-17055066
GeneTranscriptPositionBiotype
ENSG00000197872 (FAM49A)
family with sequence similarity 49, member A 		ENST00000381323 (FAM49A-001) 16549459-16665834 protein_coding
ENST00000406434 (FAM49A-002) 16552936-16665828 protein_coding
ENST00000445605 (FAM49A-003) 16564005-16666086 protein_coding
ENST00000451689 (FAM49A-004) 16564024-16666331 protein_coding
ENST00000469507 (FAM49A-005) 16560657-16561482 retained_intron
ENSG00000223536 (AC008069.1)
 ENST00000423925 (AC008069.1-002) 16728124-16767409 lincRNA
ENST00000448650 (AC008069.1-001) 16728124-16767555 lincRNA
ENSG00000224604 (AC008069.2)
 ENST00000444710 (AC008069.2-001) 16853820-16855284 processed_pseudogene
ENSG00000237633 (AC104623.2)
 ENST00000443066 (AC104623.2-002) 16523190-16527809 antisense
ENST00000446357 (AC104623.2-001) 16523176-16529387 antisense
ENSG00000279663 (AC104623.1)
 ENST00000623477 (AC104623.1-201) 16541690-16545695 pseudogene
CIL_00094N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm103 VISTA 10090 12:11879096-12479918
GeneTranscriptPositionBiotype
ENSMUSG00000020589 (Fam49a)
family with sequence similarity 49, member A 		ENSMUST00000069005 (Fam49a-201) 12262139-12376359 protein_coding
ENSMUST00000069066 (Fam49a-202) 12262139-12376359 protein_coding
ENSMUSG00000078377 (Gm4294)
predicted gene 4294 		ENSMUST00000105169 (Gm4294-201) 12023043-12023657 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094N_0001ENSG00000197872ENST00000381323ENST00000406434ENST00000445605ENST00000451689ENST00000469507ENSG00000223536ENST00000423925ENST00000448650ENSG00000224604ENST00000444710ENSG00000237633ENST00000443066ENST00000446357ENSG00000279663ENST00000623477CIL_00094N_0002ENSMUSG00000020589ENSMUST00000069005ENSMUST00000069066ENSMUSG00000078377ENSMUST00000105169
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094N_0001ENSG00000197872ENST00000381323ENST00000406434ENST00000445605ENSG00000223536ENST00000423925ENST00000448650ENSG00000224604ENST00000444710ENSG00000237633ENST00000443066ENST00000446357ENSG00000279663ENST00000623477CIL_00094N_0002ENSMUSG00000020589ENSMUST00000069005ENSMUST00000069066ENSMUSG00000078377ENSMUST00000105169
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197872 ENST00000381323 8.357±0.00 4.386±0.00 0.254±0.00 14.182±4.62 3.859±0.00 3.188±2.27 0.964±0.00 0.696±0.00 1.019±0.21 3.851±0.00 5.312±0.00 3.009±0.13 5.791±0.35 1.151±0.89
ENST00000406434 N/A N/A 0.229±0.00 N/A N/A N/A N/A N/A N/A 6.001±0.00 N/A 0.298±0.00 3.033±0.00 0.389±0.00
ENST00000445605 N/A N/A N/A N/A 4.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223536 ENST00000423925 N/A N/A N/A 0.487±0.35 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENST00000448650 N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000224604 ENST00000444710 0.035±0.00 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237633 ENST00000443066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.00
ENST00000446357 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279663 ENST00000623477 0.016±0.00 0.108±0.00 N/A 0.336±0.11 0.043±0.00 0.020±0.00 0.002±0.00 0.018±0.00 0.016±0.00 0.080±0.08 N/A 0.009±0.00 N/A 0.066±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020589 ENSMUST00000069005 3.923±0.40 2.563±0.74 3.837±0.45 10.141±4.21 2.223±0.28 1.514±0.17 1.384±0.14 1.014±0.25 0.439±0.11 5.161±0.23 0.458±0.10 1.683±1.15 2.087±1.14 0.126±0.06
ENSMUST00000069066 0.688±0.00 0.302±0.00 1.770±0.57 3.250±0.65 0.848±0.30 0.249±0.05 0.286±0.13 0.308±0.05 0.252±0.12 1.082±0.39 0.312±0.05 0.506±0.23 0.607±0.07 0.047±0.00
ENSMUSG00000078377 ENSMUST00000105169 0.078±0.00 N/A 44.062±0.00 9.591±13.46 N/A 0.147±0.02 N/A N/A 26.012±36.48 N/A 0.095±0.00 0.201±0.10 0.069±0.03 0.082±0.00

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