C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 480
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198464 ZNF480 9606 + 19:52297177-52325922 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334564 ZNF480-005 52297179-52323158 protein_coding
  ENST00000335090 ZNF480-003 52300394-52324080 protein_coding
  ENST00000468240 ZNF480-007 52297177-52325919 nonsense_mediated_decay
  ENST00000490272 ZNF480-002 52297179-52323680 protein_coding
  ENST00000595962 ZNF480-001 52297177-52325922 protein_coding
  ENST00000598016 ZNF480-006 52297179-52321647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334564ENST00000335090ENST00000468240ENST00000595962ENST00000598016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENST00000335090 N/A N/A 1.364±0.00 N/A N/A N/A 0.367±0.00 0.219±0.00 N/A N/A N/A 0.862±0.00 N/A N/A
ENST00000468240 N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 N/A N/A N/A N/A N/A
ENST00000595962 0.697±0.00 1.942±0.00 0.797±0.00 0.498±0.17 1.551±1.02 0.692±0.00 0.929±0.09 2.131±1.62 0.530±0.16 0.755±0.42 0.305±0.16 1.446±0.58 0.476±0.23 0.796±0.23
ENST00000598016 4.374±0.00 8.327±0.00 N/A 2.438±0.00 2.728±0.00 6.062±0.00 4.863±0.00 1.346±0.00 2.611±0.00 7.143±0.00 4.280±0.00 2.839±0.00 1.670±0.54 2.237±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0005 CGP 19:52269571-52325922
CIL_0006L8 CIL_0006L8_0006 CGP 19:52297177-52367778

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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