C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin-associated protein), delta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399039 CTNND1-202 ENSG00000198561 9606 + 11:57753290-57818445 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungMuscleOvaryPlacentaTestisENST00000399039
Transcript ID Brain Breast Lung Muscle Ovary Placenta Testis
ENST00000399039 12.384±0.00 15.912±0.00 26.070±0.00 3.185±0.00 19.711±0.00 29.160±0.00 33.075±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067232 Ctnnd1-002 protein_coding Mus_musculus 0 4684
ENSMUST00000189772 CTNND1-001 protein_coding Mus_musculus 0 4682
ENSMUST00000111693 Ctnnd1-021 protein_coding Mus_musculus 0 4567
ENSMUST00000111692 Ctnnd1-011 protein_coding Mus_musculus 0 4567
ENSMUST00000111691 Ctnnd1-001 protein_coding Mus_musculus 0 4562
ENSMUST00000111689 Ctnnd1-008 protein_coding Mus_musculus 0 4429
ENSMUST00000111690 Ctnnd1-013 protein_coding Mus_musculus 0 4313
ENSMUST00000111688 Ctnnd1-016 protein_coding Mus_musculus 0 4311
ENSMUST00000111686 Ctnnd1-015 protein_coding Mus_musculus 0 4311
ENSMUST00000099941 Ctnnd1-019 protein_coding Mus_musculus 0 4150
ENSMUST00000111670 Ctnnd1-201 protein_coding Mus_musculus 0 4047
ENSMUST00000111698 Ctnnd1-018 protein_coding Mus_musculus 0 4032
ENSMUST00000111694 Ctnnd1-022 protein_coding Mus_musculus 0 3965
ENSMUST00000111695 Ctnnd1-014 protein_coding Mus_musculus 0 3849
ENSMUST00000036811 Ctnnd1-003 protein_coding Mus_musculus 0 3760
ENSMUST00000111684 Ctnnd1-007 protein_coding Mus_musculus 0 3709
ENSMUST00000111696 Ctnnd1-006 protein_coding Mus_musculus 0 3644
ENSMUST00000111697 Ctnnd1-202 protein_coding Mus_musculus 0 3639
ENSMUST00000111687 Ctnnd1-009 protein_coding Mus_musculus 0 3592
ENSMUST00000066177 Ctnnd1-004 protein_coding Mus_musculus 0 3522
ENSMUST00000111685 Ctnnd1-012 protein_coding Mus_musculus 0 3506
ENSMUST00000111678 Ctnnd1-010 protein_coding Mus_musculus 0 3430
ENSMUST00000111676 Ctnnd1-020 protein_coding Mus_musculus 0 3314
ENSMUST00000111677 Ctnnd1-017 protein_coding Mus_musculus 0 3110
ENSMUST00000111675 Ctnnd1-023 protein_coding Mus_musculus 0 3037
ENSMUST00000145312 Ctnnd1-005 processed_transcript Mus_musculus 0 2985
ENSMUST00000150940 Ctnnd1-028 processed_transcript Mus_musculus 0 924
ENSMUST00000131926 Ctnnd1-026 processed_transcript Mus_musculus 0 846
ENSMUST00000141151 Ctnnd1-027 processed_transcript Mus_musculus 0 475
ENSMUST00000126092 Ctnnd1-025 processed_transcript Mus_musculus 0 387
ENSMUST00000149317 Ctnnd1-024 processed_transcript Mus_musculus 0 320

Loading