C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin-associated protein), delta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415361 CTNND1-027 ENSG00000198561 9606 + 11:57761797-57819178 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000415361
Transcript ID Muscle
ENST00000415361 0.997±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IMP cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 NAS cell adhesion
GO:0016055 IEA Wnt signaling pathway
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030496 IDA midbody
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0045216 TAS cell-cell junction organization
GO:0045296 IEA:IPI cadherin binding
GO:0070062 IDA extracellular vesicular exosome
GO:0090090 IMP negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111678 Ctnnd1-010 protein_coding Mus_musculus 0 4804
ENSMUST00000111684 Ctnnd1-007 protein_coding Mus_musculus 0 4700
ENSMUST00000111694 Ctnnd1-022 protein_coding Mus_musculus 0 4700
ENSMUST00000111676 Ctnnd1-020 protein_coding Mus_musculus 0 4687
ENSMUST00000111687 Ctnnd1-009 protein_coding Mus_musculus 0 4584
ENSMUST00000111695 Ctnnd1-014 protein_coding Mus_musculus 0 4584
ENSMUST00000099941 Ctnnd1-019 protein_coding Mus_musculus 0 3539
ENSMUST00000111691 Ctnnd1-001 protein_coding Mus_musculus 0 3435
ENSMUST00000111689 Ctnnd1-008 protein_coding Mus_musculus 0 3435
ENSMUST00000067232 Ctnnd1-002 protein_coding Mus_musculus 0 3435
ENSMUST00000189772 CTNND1-001 protein_coding Mus_musculus 0 3435
ENSMUST00000111670 Ctnnd1-201 protein_coding Mus_musculus 0 3417
ENSMUST00000111693 Ctnnd1-021 protein_coding Mus_musculus 0 3319
ENSMUST00000111688 Ctnnd1-016 protein_coding Mus_musculus 0 3319
ENSMUST00000111686 Ctnnd1-015 protein_coding Mus_musculus 0 3319
ENSMUST00000111692 Ctnnd1-011 protein_coding Mus_musculus 0 3319
ENSMUST00000111690 Ctnnd1-013 protein_coding Mus_musculus 0 3319
ENSMUST00000111698 Ctnnd1-018 protein_coding Mus_musculus 0 3317
ENSMUST00000111697 Ctnnd1-202 protein_coding Mus_musculus 0 3227
ENSMUST00000036811 Ctnnd1-003 protein_coding Mus_musculus 0 3227
ENSMUST00000111685 Ctnnd1-012 protein_coding Mus_musculus 0 3227
ENSMUST00000111677 Ctnnd1-017 protein_coding Mus_musculus 0 3214
ENSMUST00000066177 Ctnnd1-004 protein_coding Mus_musculus 0 3110
ENSMUST00000111696 Ctnnd1-006 protein_coding Mus_musculus 0 3110
ENSMUST00000145312 Ctnnd1-005 processed_transcript Mus_musculus 0 3088
ENSMUST00000111675 Ctnnd1-023 protein_coding Mus_musculus 0 2322
ENSMUST00000131926 Ctnnd1-026 processed_transcript Mus_musculus 0 846
ENSMUST00000150940 Ctnnd1-028 processed_transcript Mus_musculus 0 708
ENSMUST00000141151 Ctnnd1-027 processed_transcript Mus_musculus 0 475

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