C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin B3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198753 PLXNB3 9606 + X:153764196-153779346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361971 PLXNB3-001 153764256-153779341 protein_coding
  ENST00000411613 PLXNB3-008 153774759-153776956 protein_coding
  ENST00000448847 PLXNB3-002 153777517-153778301 protein_coding
  ENST00000455214 PLXNB3-003 153775976-153777032 protein_coding
  ENST00000469190 PLXNB3-006 153778191-153779340 processed_transcript
  ENST00000472415 PLXNB3-007 153778382-153779340 processed_transcript
  ENST00000482654 PLXNB3-005 153774929-153776399 processed_transcript
  ENST00000485980 PLXNB3-004 153777242-153778326 processed_transcript
  ENST00000538966 PLXNB3-201 153764196-153779346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENST00000361971ENST00000411613ENST00000448847ENST00000455214ENST00000469190ENST00000482654ENST00000485980ENST00000538966
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000361971 N/A 0.726±0.00 0.014±0.00 5.169±3.60 0.322±0.19 1.468±1.18 N/A 0.132±0.00 0.605±0.08 0.129±0.05 2.519±0.75
ENST00000411613 N/A N/A 0.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448847 N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A 0.258±0.00 N/A
ENST00000455214 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.00 11.927±0.00
ENST00000469190 1.829±0.00 N/A N/A N/A N/A N/A N/A N/A 3.810±0.00 N/A N/A
ENST00000482654 N/A N/A 0.098±0.00 N/A 0.724±0.00 1.352±0.00 N/A N/A N/A N/A N/A
ENST00000485980 N/A N/A N/A N/A 0.752±0.00 7.613±0.00 N/A 0.221±0.00 N/A N/A N/A
ENST00000538966 0.578±0.00 N/A N/A 5.376±0.00 N/A 1.224±0.00 0.398±0.00 N/A 0.441±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GI CIL_0007GI_0002 CGP X:153724868-153779346
CIL_0007GB CIL_0007GB_0002 CGP X:153764196-153785732

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001938 IMP positive regulation of endothelial cell proliferation
GO:0004872 IEA receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0007162 IDA negative regulation of cell adhesion
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0010593 ISS negative regulation of lamellipodium assembly
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017154 IDA semaphorin receptor activity
GO:0019904 IPI protein domain specific binding
GO:0030336 IMP negative regulation of cell migration
GO:0034260 IMP negative regulation of GTPase activity
GO:0050918 IDA positive chemotaxis
GO:0051022 IEA Rho GDP-dissociation inhibitor binding
GO:0060326 IDA cell chemotaxis
GO:0071526 IDA semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032990 plxnb3 plexin B3 protein_coding Danio_rerio
ENSDARG00000077486 plxna1 plexin A1 protein_coding Danio_rerio
ENSMUSG00000031385 Plxnb3 plexin B3 protein_coding Mus_musculus

Loading