C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007GB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032990-ENSDARG00000005916 CGP 7955 8:8711118-8884205
GeneTranscriptPositionBiotype
ENSDARG00000005916 (srpk3)
serine/arginine-rich protein specific kinase 3 		ENSDART00000151314 (srpk3-001) 8836325-8884205 protein_coding
ENSDARG00000032990 (plxnb3)
plexin B3 		ENSDART00000026965 (plxnb3-201) 8740920-8827050 protein_coding
ENSDART00000139719 (plxnb3-003) 8789081-8789934 retained_intron
ENSDART00000144838 (plxnb3-001) 8783560-8827388 protein_coding
ENSDART00000147940 (plxnb3-002) 8711118-8777460 protein_coding
CIL_0007GB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198753-ENSG00000184343 CGP 9606 X:153764196-153785732
GeneTranscriptPositionBiotype
ENSG00000184343 (SRPK3)
SRSF protein kinase 3 		ENST00000370100 (SRPK3-002) 153781116-153785728 protein_coding
ENST00000370101 (SRPK3-006) 153781041-153785728 protein_coding
ENST00000370104 (SRPK3-005) 153781039-153785524 protein_coding
ENST00000370108 (SRPK3-001) 153781039-153785730 protein_coding
ENST00000393786 (SRPK3-201) 153781001-153785732 protein_coding
ENST00000430541 (SRPK3-003) 153781116-153782869 protein_coding
ENST00000458681 (SRPK3-004) 153784704-153785404 protein_coding
ENST00000489426 (SRPK3-007) 153776412-153785728 protein_coding
ENSG00000198753 (PLXNB3)
plexin B3 		ENST00000361971 (PLXNB3-001) 153764256-153779341 protein_coding
ENST00000411613 (PLXNB3-008) 153774759-153776956 protein_coding
ENST00000448847 (PLXNB3-002) 153777517-153778301 protein_coding
ENST00000455214 (PLXNB3-003) 153775976-153777032 protein_coding
ENST00000469190 (PLXNB3-006) 153778191-153779340 processed_transcript
ENST00000472415 (PLXNB3-007) 153778382-153779340 processed_transcript
ENST00000482654 (PLXNB3-005) 153774929-153776399 processed_transcript
ENST00000485980 (PLXNB3-004) 153777242-153778326 processed_transcript
ENST00000538966 (PLXNB3-201) 153764196-153779346 protein_coding
ENSG00000232725 (U52111.14)
 ENST00000416854 (U52111.14-002) 153760491-153766478 antisense
ENST00000434284 (U52111.14-001) 153735626-153766453 antisense
CIL_0007GB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031385-ENSMUSG00000002007 CGP 10090 X:73757090-73778925
GeneTranscriptPositionBiotype
ENSMUSG00000002007 (Srpk3)
serine/arginine-rich protein specific kinase 3 		ENSMUST00000002081 (Srpk3-001) 73774405-73778925 protein_coding
ENSMUST00000136664 (Srpk3-002) 73774405-73778925 retained_intron
ENSMUST00000137045 (Srpk3-003) 73777945-73778602 retained_intron
ENSMUST00000139630 (Srpk3-004) 73777978-73778728 retained_intron
ENSMUSG00000031385 (Plxnb3)
plexin B3 		ENSMUST00000002079 (Plxnb3-006) 73757099-73772514 protein_coding
ENSMUST00000146812 (Plxnb3-002) 73757090-73772514 retained_intron
ENSMUST00000147127 (Plxnb3-003) 73757090-73772514 retained_intron
ENSMUST00000149478 (Plxnb3-001) 73757090-73772514 retained_intron
ENSMUST00000155096 (Plxnb3-004) 73765531-73769664 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GB_0001ENSDARG00000005916ENSDART00000151314ENSDARG00000032990ENSDART00000026965ENSDART00000139719ENSDART00000144838ENSDART00000147940CIL_0007GB_0002ENSG00000184343ENST00000370100ENST00000370101ENST00000370104ENST00000370108ENST00000393786ENST00000430541ENST00000458681ENST00000489426ENSG00000198753ENST00000361971ENST00000411613ENST00000448847ENST00000455214ENST00000469190ENST00000472415ENST00000482654ENST00000485980ENST00000538966ENSG00000232725ENST00000416854ENST00000434284CIL_0007GB_0003ENSMUSG00000002007ENSMUST00000002081ENSMUST00000136664ENSMUST00000137045ENSMUST00000139630ENSMUSG00000031385ENSMUST00000002079ENSMUST00000146812ENSMUST00000147127ENSMUST00000149478ENSMUST00000155096
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GB_0001ENSDARG00000005916ENSDART00000151314ENSDARG00000032990ENSDART00000026965ENSDART00000144838ENSDART00000147940CIL_0007GB_0002ENSG00000184343ENST00000370100ENST00000370101ENST00000370104ENST00000393786ENST00000430541ENST00000489426ENSG00000198753ENST00000361971ENST00000411613ENST00000448847ENST00000455214ENST00000469190ENST00000482654ENST00000485980ENST00000538966ENSG00000232725ENST00000416854ENST00000434284CIL_0007GB_0003ENSMUSG00000002007ENSMUST00000002081ENSMUST00000136664ENSMUST00000137045ENSMUST00000139630ENSMUSG00000031385ENSMUST00000002079ENSMUST00000146812ENSMUST00000147127ENSMUST00000149478ENSMUST00000155096
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005916 ENSDART00000151314 N/A N/A N/A 6.275±4.11 N/A N/A 6.385±1.19 1.426±0.69 0.137±0.00 N/A 7.170±0.00 N/A N/A N/A
ENSDARG00000032990 ENSDART00000026965 N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144838 N/A N/A N/A 1.306±0.00 N/A N/A 0.587±0.10 0.137±0.00 0.030±0.00 N/A 0.203±0.00 N/A N/A N/A
ENSDART00000147940 N/A N/A N/A N/A N/A N/A 0.337±0.08 N/A 0.033±0.00 N/A 0.101±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184343 ENST00000370100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 3.981±0.00 0.157±0.00 N/A N/A
ENST00000370101 N/A N/A N/A N/A 0.774±0.00 N/A 3.872±3.57 N/A N/A N/A 9.742±3.91 0.170±0.00 N/A N/A
ENST00000370104 N/A N/A N/A N/A 1.049±0.00 N/A 2.552±2.22 N/A N/A N/A 10.652±4.12 N/A 0.142±0.00 N/A
ENST00000370108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.965±0.00 N/A N/A N/A
ENST00000430541 N/A N/A N/A N/A 0.769±0.00 N/A 1.170±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489426 N/A 0.697±0.00 N/A N/A 0.520±0.00 N/A N/A 0.188±0.00 N/A N/A N/A 0.263±0.00 N/A 0.920±0.00
ENSG00000198753 ENST00000361971 N/A 0.726±0.00 0.014±0.00 5.169±3.60 0.322±0.19 1.468±1.18 N/A N/A N/A 0.132±0.00 N/A 0.605±0.08 0.129±0.05 2.519±0.75
ENST00000411613 N/A N/A 0.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448847 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A N/A 0.258±0.00 N/A
ENST00000455214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.00 11.927±0.00
ENST00000469190 1.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.810±0.00 N/A N/A
ENST00000472415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482654 N/A N/A 0.098±0.00 N/A 0.724±0.00 1.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485980 N/A N/A N/A N/A 0.752±0.00 7.613±0.00 N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A
ENST00000538966 0.578±0.00 N/A N/A 5.376±0.00 N/A 1.224±0.00 N/A N/A 0.398±0.00 N/A N/A 0.441±0.00 N/A N/A
ENSG00000232725 ENST00000416854 N/A 0.901±0.00 N/A 1.495±0.00 N/A 1.558±0.00 0.122±0.00 0.879±0.00 0.252±0.00 2.178±0.00 N/A 0.749±0.00 0.345±0.00 0.471±0.12
ENST00000434284 N/A 0.142±0.00 0.532±0.00 0.378±0.00 0.337±0.24 0.221±0.01 N/A 0.025±0.00 0.042±0.00 0.299±0.00 N/A 0.104±0.05 0.098±0.02 0.370±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002007 ENSMUST00000002081 0.530±0.47 0.252±0.14 2.020±0.33 0.103±0.03 6.418±1.79 1.371±0.15 15.758±1.22 0.608±0.14 0.182±0.20 2.513±0.50 16.315±1.32 0.900±0.45 0.080±0.01 0.121±0.07
ENSMUST00000136664 0.370±0.14 0.292±0.15 0.799±0.00 0.598±0.65 2.090±0.94 0.746±0.00 4.113±0.17 0.465±0.00 0.094±0.04 1.295±0.49 2.977±0.31 0.396±0.16 0.058±0.00 0.062±0.02
ENSMUST00000137045 3.086±0.00 0.252±0.03 N/A 0.167±0.00 N/A 1.873±0.00 N/A 0.809±0.00 0.145±0.05 1.900±0.00 N/A 0.607±0.00 0.122±0.00 0.247±0.00
ENSMUST00000139630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.00 0.360±0.00 N/A
ENSMUSG00000031385 ENSMUST00000002079 0.156±0.00 0.348±0.14 0.231±0.03 0.286±0.21 0.235±0.10 0.137±0.06 0.263±0.02 0.050±0.03 0.023±0.01 N/A 0.070±0.02 N/A 0.043±0.00 0.007±0.00
ENSMUST00000146812 N/A 0.178±0.00 0.099±0.01 1.460±0.00 0.073±0.03 N/A N/A 0.051±0.00 0.033±0.01 N/A 0.089±0.01 0.121±0.04 0.017±0.01 0.028±0.00
ENSMUST00000147127 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.124±0.00 0.093±0.03 N/A 0.031±0.00
ENSMUST00000149478 N/A N/A N/A N/A N/A 0.134±0.04 0.213±0.00 N/A 0.026±0.00 0.084±0.00 0.078±0.03 0.213±0.02 N/A 0.002±0.00
ENSMUST00000155096 0.105±0.00 0.252±0.03 N/A 1.545±0.00 0.262±0.02 0.262±0.00 0.483±0.12 0.179±0.10 0.040±0.02 0.251±0.00 N/A 0.634±0.52 0.027±0.02 N/A

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