C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shisa family member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198892 SHISA4 9606 + 1:201888680-201892306 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000362011 SHISA4-001 201888708-201892306 protein_coding
  ENST00000464117 SHISA4-002 201888680-201892137 processed_transcript
  ENST00000481699 SHISA4-003 201888934-201890493 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000362011ENST00000464117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000362011 6.840±0.00 4.024±0.00 0.552±0.00 35.214±25.46 6.942±0.00 9.189±0.00 46.929±0.00 4.871±2.97 1.112±0.60 3.861±3.29 48.018±9.25 6.388±7.23 4.663±0.89 8.823±4.38
ENST00000464117 4.565±0.00 1.969±0.00 N/A 29.875±0.00 9.109±0.00 3.337±0.00 15.016±0.00 3.618±0.00 0.394±0.00 1.020±0.00 23.322±0.00 4.625±4.11 3.834±1.53 5.377±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LX CIL_0001LX_0002 CGP 1:201829141-201892306
CIL_0001LU CIL_0001LU_0002 CGP 1:201888680-201946588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006307 shisa4 shisa homolog 4 (Xenopus laevis) protein_coding Danio_rerio
ENSDARG00000013681 SHISA4 (2 of 3) shisa family member 4 protein_coding Danio_rerio
ENSDARG00000071543 SHISA4 (3 of 3) shisa family member 4 protein_coding Danio_rerio
ENSMUSG00000041889 Shisa4 shisa family member 4 protein_coding Mus_musculus

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