C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shisa family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000362011 SHISA4-001 ENSG00000198892 9606 + 1:201888708-201892306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000362011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000362011 6.840±0.00 4.024±0.00 0.552±0.00 35.214±25.46 6.942±0.00 9.189±0.00 46.929±0.00 4.871±2.97 1.112±0.60 3.861±3.29 48.018±9.25 6.388±7.23 4.663±0.89 8.823±4.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LX CIL_0001LX_0002 CGP 1:201829141-201892306
CIL_0001LU CIL_0001LU_0002 CGP 1:201888680-201946588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041240 Shisa4-001 protein_coding Mus_musculus 0 1037
ENSMUST00000159918 Shisa4-003 retained_intron Mus_musculus 0 632
ENSMUST00000159181 Shisa4-002 retained_intron Mus_musculus 0 337

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