C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001LU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006307-ENSDARG00000077261 CGP 7955 11:25811379-25827976
GeneTranscriptPositionBiotype
ENSDARG00000006307 (shisa4)
shisa homolog 4 (Xenopus laevis)
ENSDART00000006038 (shisa4-001) 25811379-25819276 protein_coding
ENSDARG00000077261 (CR628365.1)
Uncharacterized protein
ENSDART00000113310 (CR628365.1-201) 25822938-25827976 protein_coding
CIL_0001LU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198892-ENSG00000163431 CGP 9606 1:201888680-201946588
GeneTranscriptPositionBiotype
ENSG00000163431 (LMOD1)
leiomodin 1 (smooth muscle)
ENST00000367288 (LMOD1-001) 201896452-201946587 protein_coding
ENST00000616739 (LMOD1-201) 201896456-201946588 protein_coding
ENSG00000198892 (SHISA4)
shisa family member 4
ENST00000362011 (SHISA4-001) 201888708-201892306 protein_coding
ENST00000464117 (SHISA4-002) 201888680-201892137 processed_transcript
ENST00000481699 (SHISA4-003) 201888934-201890493 processed_transcript
ENSG00000278750 (AC099676.1)
ENST00000617963 (AC099676.1-201) 201921644-201921736 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LU_0001ENSDARG00000006307ENSDART00000006038ENSDARG00000077261ENSDART00000113310CIL_0001LU_0002ENSG00000163431ENST00000367288ENST00000616739ENSG00000198892ENST00000362011ENST00000464117ENST00000481699ENSG00000278750ENST00000617963
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LU_0001ENSDARG00000006307ENSDART00000006038ENSDARG00000077261ENSDART00000113310CIL_0001LU_0002ENSG00000163431ENST00000367288ENST00000616739ENSG00000198892ENST00000362011ENST00000464117ENSG00000278750ENST00000617963
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006307 ENSDART00000006038 N/A N/A N/A 9.367±0.00 N/A N/A 1.960±0.62 0.362±0.08 0.034±0.00 N/A 2.335±0.00 N/A N/A N/A
ENSDARG00000077261 ENSDART00000113310 N/A N/A N/A 0.671±0.26 N/A N/A 8.389±5.62 13.882±8.66 0.021±0.00 N/A 1.034±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163431 ENST00000367288 94.406±0.00 17.472±0.00 0.497±0.00 4.935±4.87 15.027±7.99 34.978±27.05 1.507±1.02 4.488±4.31 24.554±23.81 20.530±19.34 14.733±13.90 24.753±23.66 28.984±6.98 14.202±7.33
ENST00000616739 N/A N/A 0.216±0.00 0.222±0.00 N/A N/A 0.377±0.00 N/A 0.332±0.00 N/A 2.483±0.00 5.392±0.00 N/A N/A
ENSG00000198892 ENST00000362011 6.840±0.00 4.024±0.00 0.552±0.00 35.214±25.46 6.942±0.00 9.189±0.00 46.929±0.00 4.871±2.97 1.112±0.60 3.861±3.29 48.018±9.25 6.388±7.23 4.663±0.89 8.823±4.38
ENST00000464117 4.565±0.00 1.969±0.00 N/A 29.875±0.00 9.109±0.00 3.337±0.00 15.016±0.00 3.618±0.00 0.394±0.00 1.020±0.00 23.322±0.00 4.625±4.11 3.834±1.53 5.377±1.39
ENST00000481699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278750 ENST00000617963 N/A 0.983±0.00 N/A 0.362±0.00 N/A 0.628±0.00 N/A N/A N/A N/A N/A N/A N/A 0.912±0.00

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