C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII)-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044550 Tceal3 10090 + X:136590842-136668378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060904 Tceal3-001 136666375-136668378 protein_coding
  ENSMUST00000113100 Tceal3-006 136666403-136668374 protein_coding
  ENSMUST00000125067 Tceal3-004 136590848-136646507 processed_transcript
  ENSMUST00000128040 Tceal3-007 136666611-136668065 protein_coding
  ENSMUST00000138047 Tceal3-002 136590842-136667693 protein_coding
  ENSMUST00000145648 Tceal3-005 136590844-136667549 protein_coding
  ENSMUST00000153780 Tceal3-003 136590855-136647070 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060904ENSMUST00000113100ENSMUST00000125067ENSMUST00000128040ENSMUST00000138047ENSMUST00000153780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060904 1.092±0.92 3.717±1.38 6.110±0.01 22.948±12.93 0.206±0.11 1.561±0.42 0.208±0.09 0.230±0.07 0.208±0.29 0.305±0.07 0.156±0.08 2.904±0.99 0.802±0.78 0.927±0.18
ENSMUST00000113100 0.511±0.24 2.200±0.48 N/A 4.448±1.12 0.263±0.05 0.426±0.19 0.262±0.11 0.197±0.13 0.092±0.00 0.341±0.09 N/A 1.216±0.39 0.289±0.00 0.223±0.02
ENSMUST00000125067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.02 N/A
ENSMUST00000128040 N/A N/A 3.476±0.16 67.670±58.72 0.185±0.00 N/A 0.136±0.04 N/A 0.478±0.31 N/A 0.237±0.11 9.695±1.50 0.596±0.15 4.160±0.00
ENSMUST00000138047 N/A N/A N/A 47.055±0.00 N/A N/A N/A N/A N/A N/A N/A 5.943±0.00 0.415±0.26 6.649±0.00
ENSMUST00000153780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AM CIL_0002AM_0002 CGP X:136590842-136711478

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196507 TCEAL3 transcription elongation factor A (SII)-like 3 protein_coding Homo_sapiens
ENSG00000204065 TCEAL5 transcription elongation factor A (SII)-like 5 protein_coding Homo_sapiens
ENSG00000204071 TCEAL6 transcription elongation factor A (SII)-like 6 protein_coding Homo_sapiens

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