C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRB10 interacting GYF protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204120 GIGYF2 9606 + 2:232697299-232858627 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373563 GIGYF2-006 232697307-232858612 protein_coding
  ENST00000409196 GIGYF2-003 232697338-232858627 protein_coding
  ENST00000409451 GIGYF2-005 232697346-232858608 protein_coding
  ENST00000409480 GIGYF2-004 232697310-232858608 protein_coding
  ENST00000409547 GIGYF2-001 232697331-232858627 protein_coding
  ENST00000410033 GIGYF2-040 232788106-232791348 protein_coding
  ENST00000421433 GIGYF2-024 232697331-232756235 protein_coding
  ENST00000421778 GIGYF2-036 232768099-232790774 protein_coding
  ENST00000423659 GIGYF2-012 232697333-232816993 protein_coding
  ENST00000424038 GIGYF2-032 232703421-232787247 nonsense_mediated_decay
  ENST00000424414 GIGYF2-039 232764436-232791035 protein_coding
  ENST00000425040 GIGYF2-025 232697331-232756254 protein_coding
  ENST00000426102 GIGYF2-044 232842960-232845787 protein_coding
  ENST00000427233 GIGYF2-015 232697305-232735237 protein_coding
  ENST00000427649 GIGYF2-047 232776752-232791337 protein_coding
  ENST00000428883 GIGYF2-017 232697308-232756301 protein_coding
  ENST00000429187 GIGYF2-029 232697352-232756274 protein_coding
  ENST00000430720 GIGYF2-026 232697331-232756293 protein_coding
  ENST00000436349 GIGYF2-038 232764462-232790915 protein_coding
  ENST00000440945 GIGYF2-007 232697352-232819982 protein_coding
  ENST00000445650 GIGYF2-035 232764444-232790850 protein_coding
  ENST00000455139 GIGYF2-037 232768102-232790915 protein_coding
  ENST00000456491 GIGYF2-019 232697310-232760559 protein_coding
  ENST00000458528 GIGYF2-041 232788464-232794789 nonsense_mediated_decay
  ENST00000463554 GIGYF2-011 232697350-232771424 processed_transcript
  ENST00000464402 GIGYF2-023 232697331-232735961 processed_transcript
  ENST00000464805 GIGYF2-009 232697370-232736645 processed_transcript
  ENST00000469843 GIGYF2-043 232832871-232844196 processed_transcript
  ENST00000471011 GIGYF2-045 232839853-232844544 retained_intron
  ENST00000473170 GIGYF2-033 232765292-232768374 processed_transcript
  ENST00000474312 GIGYF2-013 232810311-232858612 retained_intron
  ENST00000474465 GIGYF2-028 232697349-232705947 processed_transcript
  ENST00000475359 GIGYF2-016 232697331-232736295 processed_transcript
  ENST00000475530 GIGYF2-034 232765485-232768397 processed_transcript
  ENST00000476995 GIGYF2-014 232697299-232736214 processed_transcript
  ENST00000482666 GIGYF2-008 232697362-232736541 processed_transcript
  ENST00000482952 GIGYF2-042 232806614-232815909 retained_intron
  ENST00000483164 GIGYF2-031 232697369-232736015 processed_transcript
  ENST00000484409 GIGYF2-018 232697323-232735451 retained_intron
  ENST00000488629 GIGYF2-021 232697331-232735588 retained_intron
  ENST00000488734 GIGYF2-027 232697344-232736268 processed_transcript
  ENST00000489328 GIGYF2-010 232697383-232736648 processed_transcript
  ENST00000490229 GIGYF2-030 232697369-232736342 processed_transcript
  ENST00000490612 GIGYF2-022 232697331-232736037 processed_transcript
  ENST00000492910 GIGYF2-020 232697330-232736234 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373563ENST00000409196ENST00000409547ENST00000423659ENST00000456491ENST00000474312ENST00000488629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373563 8.751±0.00 N/A N/A 3.622±0.00 4.531±0.11 2.832±0.00 2.361±1.31 3.020±1.20 12.267±0.00 2.447±0.84 4.488±2.91 6.182±3.00 3.692±1.73 7.550±3.06
ENST00000409196 2.171±0.00 2.877±0.00 N/A 6.652±0.00 3.600±0.00 2.992±0.00 3.154±0.00 4.801±1.80 2.059±0.00 1.637±0.00 N/A 3.645±1.07 2.726±0.34 12.327±0.00
ENST00000409547 N/A 2.141±0.00 N/A 4.833±0.00 N/A N/A 1.450±0.49 2.260±0.00 N/A N/A 3.211±2.41 N/A 2.492±1.56 5.358±0.00
ENST00000423659 N/A N/A 13.742±0.00 N/A N/A 15.507±0.00 3.021±0.00 N/A N/A 5.816±0.00 3.375±0.00 8.754±0.00 N/A N/A
ENST00000456491 N/A N/A N/A N/A N/A N/A 23.837±0.00 N/A N/A N/A 23.630±0.00 N/A N/A N/A
ENST00000474312 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.524±0.00 N/A N/A N/A N/A
ENST00000488629 N/A N/A N/A N/A N/A N/A 21.508±0.00 N/A N/A 47.347±0.00 N/A 70.677±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HW CIL_0003HW_0001 CGP 2:232606057-232858627
CIL_0003HP CIL_0003HP_0001 CGP 2:232697299-232858627

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007631 IEA feeding behavior
GO:0008219 IEA cell death
GO:0008344 IEA adult locomotory behavior
GO:0009791 IEA post-embryonic development
GO:0016020 IDA membrane
GO:0017148 IMP negative regulation of translation
GO:0021522 IEA spinal cord motor neuron differentiation
GO:0031571 IEA mitotic G1 DNA damage checkpoint
GO:0035264 IEA multicellular organism growth
GO:0044267 IEA cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0048009 IEA insulin-like growth factor receptor signaling pathway
GO:0048873 IEA homeostasis of number of cells within a tissue
GO:0050881 IEA musculoskeletal movement
GO:0050885 IEA neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009735 gigfy2 GRB10 interacting GYF protein 2 protein_coding Danio_rerio
ENSMUSG00000048000 Gigyf2 GRB10 interacting GYF protein 2 protein_coding Mus_musculus

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