C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bromodomain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204256 BRD2 9606 + 6:32968660-32981505 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374825 BRD2-001 32968660-32981505 protein_coding
  ENST00000374831 BRD2-002 32970888-32981505 protein_coding
  ENST00000395287 BRD2-005 32972730-32981505 protein_coding
  ENST00000395289 BRD2-201 32970888-32981505 protein_coding
  ENST00000449025 BRD2-006 32973084-32981505 protein_coding
  ENST00000449085 BRD2-202 32973084-32981505 protein_coding
  ENST00000456339 BRD2-009 32969319-32976618 protein_coding
  ENST00000463639 BRD2-013 32977550-32978801 retained_intron
  ENST00000464592 BRD2-011 32976142-32978214 retained_intron
  ENST00000469132 BRD2-007 32979542-32981286 retained_intron
  ENST00000481259 BRD2-012 32976569-32977901 nonsense_mediated_decay
  ENST00000482838 BRD2-014 32979682-32980766 retained_intron
  ENST00000482914 BRD2-004 32970953-32981505 nonsense_mediated_decay
  ENST00000495733 BRD2-003 32970930-32978197 nonsense_mediated_decay
  ENST00000496118 BRD2-008 32969165-32972141 protein_coding
  ENST00000580234 BRD2-019 32970238-32972116 processed_transcript
  ENST00000581002 BRD2-020 32970902-32972051 processed_transcript
  ENST00000584808 BRD2-018 32970705-32972048 processed_transcript
  ENST00000606059 BRD2-026 32976413-32977074 protein_coding
  ENST00000607833 BRD2-023 32972217-32978203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374825ENST00000374831ENST00000449025ENST00000463639ENST00000464592ENST00000482838ENST00000482914ENST00000607833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374825 N/A N/A N/A 10.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.867±0.00 N/A N/A N/A
ENST00000449025 N/A 62.547±0.00 N/A 12.620±5.34 15.710±2.33 4.237±0.00 8.521±0.00 17.137±11.58 3.670±0.00 14.967±0.00 8.436±7.05 35.279±26.35 27.129±15.65 60.997±0.00
ENST00000463639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.133±0.00 N/A N/A
ENST00000464592 N/A N/A N/A N/A N/A 10.120±0.00 N/A N/A 7.303±0.00 N/A N/A N/A N/A N/A
ENST00000482838 52.243±0.00 N/A N/A 74.094±0.00 76.690±0.00 60.631±0.00 23.787±0.00 71.022±0.00 19.424±0.00 N/A 32.233±0.00 N/A N/A 99.819±0.00
ENST00000482914 N/A N/A N/A N/A N/A N/A 4.529±0.00 12.993±0.00 3.641±1.62 N/A 9.041±0.00 25.925±3.17 8.399±0.16 N/A
ENST00000607833 N/A N/A 6.004±0.00 6.589±0.00 N/A 7.498±0.00 7.387±3.56 7.165±0.00 7.478±0.00 N/A 8.938±2.96 17.173±8.09 14.523±0.00 63.582±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006334 IMP nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0007283 TAS spermatogenesis
GO:0016568 IEA chromatin modification
GO:0070577 IDA lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022280 brd2a bromodomain-containing 2a protein_coding Danio_rerio
ENSDARG00000046087 brd2b bromodomain containing 2b protein_coding Danio_rerio
ENSMUSG00000024335 Brd2 bromodomain containing 2 protein_coding Mus_musculus

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