C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607833 BRD2-023 ENSG00000204256 9606 + 6:32972217-32978203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000607833
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000607833 6.004±0.00 6.589±0.00 7.498±0.00 7.387±3.56 7.165±0.00 7.478±0.00 8.938±2.96 17.173±8.09 14.523±0.00 63.582±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025193 Brd2-001 protein_coding Mus_musculus 0 2636
ENSMUST00000114242 Brd2-002 protein_coding Mus_musculus 0 2636
ENSMUST00000151986 Brd2-004 protein_coding Mus_musculus 0 2337
ENSMUST00000095347 Brd2-005 protein_coding Mus_musculus 0 2152
ENSMUST00000154232 Brd2-003 nonsense_mediated_decay Mus_musculus 0 1753
ENSMUST00000173204 Brd2-009 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000148143 Brd2-007 retained_intron Mus_musculus 0 409
ENSMUST00000173032 Brd2-010 protein_coding Mus_musculus 0 405

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