C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449025 BRD2-006 ENSG00000204256 9606 + 6:32973084-32981505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449025
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449025 62.547±0.00 12.620±5.34 15.710±2.33 4.237±0.00 8.521±0.00 17.137±11.58 3.670±0.00 14.967±0.00 8.436±7.05 35.279±26.35 27.129±15.65 60.997±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095347 Brd2-005 protein_coding Mus_musculus 0 3077
ENSMUST00000025193 Brd2-001 protein_coding Mus_musculus 0 3073
ENSMUST00000114242 Brd2-002 protein_coding Mus_musculus 0 3073
ENSMUST00000154232 Brd2-003 nonsense_mediated_decay Mus_musculus 0 2673
ENSMUST00000151986 Brd2-004 protein_coding Mus_musculus 0 1855
ENSMUST00000173204 Brd2-009 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000142570 Brd2-008 retained_intron Mus_musculus 0 483
ENSMUST00000148143 Brd2-007 retained_intron Mus_musculus 0 409
ENSMUST00000173032 Brd2-010 protein_coding Mus_musculus 0 405

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