C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MHC class I polypeptide-related sequence A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204520 MICA 9606 + 6:31399784-31415315 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000421350 MICA-005 31403672-31415315 protein_coding
  ENST00000449934 MICA-001 31403579-31415315 protein_coding
  ENST00000616296 MICA-202 31399784-31415313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449934ENST00000616296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449934 5.699±0.00 7.636±0.00 1.673±0.00 1.721±0.40 5.736±0.60 10.020±6.04 1.645±1.32 5.778±3.18 2.876±0.05 18.878±15.07 1.953±0.07 9.798±8.65 3.243±1.51 7.551±1.84
ENST00000616296 N/A N/A N/A 0.874±0.00 1.635±0.00 1.518±0.00 1.100±0.00 N/A 1.089±0.00 N/A N/A 1.591±0.00 0.672±0.00 1.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FP CIL_0001FP_0004 CGP 6:31399784-31511124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019882 IEA antigen processing and presentation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001470 mhc1zea major histocompatibility complex class I ZEA protein_coding Danio_rerio
ENSDARG00000036588 mhc1zba major histocompatibility complex class I ZBA protein_coding Danio_rerio
ENSDARG00000069471 mhc1zca major histocompatibility complex class I ZCA protein_coding Danio_rerio
ENSDARG00000074765 mhc1zaa major histocompatibility complex class I ZAA protein_coding Danio_rerio
ENSDARG00000076734 DARE-ZE*0601 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088022 mhc1zfa major histocompatibility complex class I ZFA protein_coding Danio_rerio
ENSDARG00000092162 mhc1zaa major histocompatibility complex class I ZAA protein_coding Danio_rerio
ENSMUSG00000040987 Mill2 MHC I like leukocyte 2 protein_coding Mus_musculus
ENSMUSG00000054005 Mill1 MHC I like leukocyte 1 protein_coding Mus_musculus

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