C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex class I ZCA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069471 mhc1zca 7955 - 1:47637895-47648897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039459 mhc1zca-201 47640917-47648885 protein_coding
  ENSDART00000063529 mhc1zca-001 47637895-47648897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039459ENSDART00000063529
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039459 0.776±0.40 N/A 0.503±0.00 0.245±0.00 N/A
ENSDART00000063529 0.184±0.07 7.148±4.64 2.665±0.80 N/A 47.337±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FP CIL_0001FP_0001 CGP 1:47613228-47648897
CIL_0001FP CIL_0001FP_0002 CGP 1:47637895-47659103

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0003823 IBA antigen binding
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0019882 IEA antigen processing and presentation
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104870 FCGRT Fc fragment of IgG, receptor, transporter, alpha protein_coding Homo_sapiens
ENSG00000204516 MICB MHC class I polypeptide-related sequence B protein_coding Homo_sapiens
ENSG00000204520 MICA MHC class I polypeptide-related sequence A protein_coding Homo_sapiens
ENSMUSG00000003420 Fcgrt Fc receptor, IgG, alpha chain transporter protein_coding Mus_musculus
ENSMUSG00000040987 Mill2 MHC I like leukocyte 2 protein_coding Mus_musculus
ENSMUSG00000054005 Mill1 MHC I like leukocyte 1 protein_coding Mus_musculus

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