C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex class I ZAA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000092162 mhc1zaa 7955 - 3:1072354-1093229 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000135595 mhc1zaa-001 1089878-1093198 protein_coding
  ENSDART00000140333 mhc1zaa-201 1089533-1093104 protein_coding
  ENSDART00000145890 mhc1zaa-002 1072354-1093229 protein_coding
  ENSDART00000155936 mhc1zaa-202 1075141-1076229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000135595ENSDART00000140333ENSDART00000145890ENSDART00000155936
Transcript ID Brain Heart Liver Muscle
ENSDART00000135595 0.109±0.00 2.134±0.00 0.135±0.00 N/A
ENSDART00000140333 0.462±0.00 N/A N/A N/A
ENSDART00000145890 0.508±0.13 N/A N/A 0.981±0.00
ENSDART00000155936 N/A N/A 0.051±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FP CIL_0001FP_0003 CGP 3:1072354-1128564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006955 IEA immune response
GO:0019882 IEA antigen processing and presentation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104870 FCGRT Fc fragment of IgG, receptor, transporter, alpha protein_coding Homo_sapiens
ENSG00000204516 MICB MHC class I polypeptide-related sequence B protein_coding Homo_sapiens
ENSG00000204520 MICA MHC class I polypeptide-related sequence A protein_coding Homo_sapiens
ENSMUSG00000003420 Fcgrt Fc receptor, IgG, alpha chain transporter protein_coding Mus_musculus
ENSMUSG00000040987 Mill2 MHC I like leukocyte 2 protein_coding Mus_musculus
ENSMUSG00000054005 Mill1 MHC I like leukocyte 1 protein_coding Mus_musculus

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