C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor gamma constant 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211689 TRGC1 9606 - 7:38257879-38330821 TR_C_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000443402 TRGC1-001 38257879-38265678 TR_C_gene
  ENST00000610889 TRGC1-201 38260088-38317492 TR_C_gene
  ENST00000613738 TRGC1-202 38259643-38330821 TR_C_gene
  ENST00000619762 TRGC1-203 38259643-38317644 TR_C_gene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000443402ENST00000610889ENST00000613738ENST00000619762
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000443402 0.501±0.00 0.216±0.00 0.037±0.00 0.044±0.00 0.020±0.00 0.018±0.01 0.086±0.00 0.019±0.00 N/A 0.041±0.01 0.142±0.00 N/A
ENST00000610889 N/A N/A 0.420±0.00 0.486±0.00 1.090±0.00 N/A N/A N/A N/A 0.098±0.00 N/A N/A
ENST00000613738 N/A N/A N/A N/A N/A 0.059±0.00 0.710±0.00 N/A N/A 0.047±0.00 N/A 0.057±0.00
ENST00000619762 N/A N/A N/A N/A 0.464±0.36 N/A 0.282±0.00 N/A 1.308±0.00 0.113±0.06 0.301±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IE CIL_0006IE_0002 CGP 7:38178222-38631567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000076749 Tcrg-C1 T cell receptor gamma, constant 1 IG_C_gene Mus_musculus
ENSMUSG00000076752 Tcrg-C2 T-cell receptor gamma, constant 2 IG_C_gene Mus_musculus
ENSMUSG00000076757 Tcrg-C4 T cell receptor gamma, constant 4 IG_C_gene Mus_musculus
ENSMUSG00000091682 Tcrg-C3 T cell receptor gamma, constant 3 protein_coding Mus_musculus

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