C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 611
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213020 ZNF611 9606 - 19:52702813-52735073 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319783 ZNF611-001 52704219-52729882 protein_coding
  ENST00000453741 ZNF611-201 52702813-52735044 protein_coding
  ENST00000540744 ZNF611-202 52702813-52735054 protein_coding
  ENST00000543227 ZNF611-203 52702813-52735054 protein_coding
  ENST00000595001 ZNF611-002 52702813-52735038 nonsense_mediated_decay
  ENST00000595798 ZNF611-004 52704732-52728786 protein_coding
  ENST00000596702 ZNF611-013 52706777-52735044 protein_coding
  ENST00000596776 ZNF611-014 52723421-52724664 retained_intron
  ENST00000597343 ZNF611-008 52706654-52735018 nonsense_mediated_decay
  ENST00000597566 ZNF611-009 52721153-52735073 processed_transcript
  ENST00000598639 ZNF611-007 52706622-52735034 nonsense_mediated_decay
  ENST00000598723 ZNF611-012 52706656-52735049 nonsense_mediated_decay
  ENST00000599798 ZNF611-011 52721183-52735015 processed_transcript
  ENST00000600943 ZNF611-006 52706611-52735048 protein_coding
  ENST00000601249 ZNF611-005 52704732-52728786 nonsense_mediated_decay
  ENST00000601447 ZNF611-010 52720909-52735038 processed_transcript
  ENST00000601643 ZNF611-016 52706460-52735044 protein_coding
  ENST00000602046 ZNF611-015 52708204-52708831 processed_transcript
  ENST00000602162 ZNF611-003 52703610-52735044 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319783ENST00000453741ENST00000540744ENST00000543227ENST00000595001ENST00000595798ENST00000596776ENST00000597343ENST00000598639ENST00000598723ENST00000601249ENST00000601447ENST00000602162
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319783 N/A 1.251±0.00 N/A 2.024±0.00 N/A 0.713±0.00 0.240±0.00 1.329±0.00 0.619±0.00 N/A N/A N/A N/A
ENST00000453741 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A
ENST00000540744 N/A N/A 0.330±0.00 N/A 1.024±0.00 0.417±0.00 0.066±0.00 N/A 0.412±0.00 N/A N/A 0.596±0.00 0.259±0.00
ENST00000543227 0.370±0.00 N/A 0.218±0.00 0.638±0.07 N/A N/A N/A N/A N/A N/A 0.716±0.00 0.593±0.02 0.642±0.00
ENST00000595001 0.322±0.00 N/A 0.225±0.00 0.388±0.00 N/A 0.311±0.00 N/A N/A N/A N/A 0.201±0.00 N/A 0.400±0.04
ENST00000595798 N/A N/A N/A N/A N/A N/A N/A N/A 0.689±0.00 0.175±0.00 0.387±0.00 N/A N/A
ENST00000596776 1.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A
ENST00000597343 N/A N/A N/A N/A N/A N/A N/A 2.115±0.00 N/A N/A N/A N/A N/A
ENST00000598639 N/A N/A N/A N/A N/A N/A 1.036±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.669±0.00 N/A N/A
ENST00000601249 N/A 0.742±0.00 N/A N/A 0.506±0.20 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601447 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A N/A
ENST00000602162 0.539±0.00 1.243±0.00 0.624±0.00 N/A N/A N/A N/A N/A 0.965±0.00 0.041±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0003 CGP 19:52594060-52735073

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

Loading