C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 23, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213901 SLC23A3 9606 - 2:219075329-219170827 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295738 SLC23A3-001 219161465-219170095 protein_coding
  ENST00000318673 SLC23A3-003 219075973-219169987 nonsense_mediated_decay
  ENST00000409370 SLC23A3-008 219168214-219169990 protein_coding
  ENST00000409878 SLC23A3-010 219161765-219170017 protein_coding
  ENST00000414999 SLC23A3-011 219167929-219169562 nonsense_mediated_decay
  ENST00000421779 SLC23A3-004 219168784-219170035 nonsense_mediated_decay
  ENST00000430764 SLC23A3-007 219168652-219170004 protein_coding
  ENST00000455516 SLC23A3-005 219161766-219170032 protein_coding
  ENST00000461812 SLC23A3-006 219169355-219170029 retained_intron
  ENST00000465580 SLC23A3-009 219168637-219170033 retained_intron
  ENST00000497918 SLC23A3-002 219164578-219170057 retained_intron
  ENST00000498327 SLC23A3-012 219075329-219170827 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLungENST00000295738ENST00000318673ENST00000498327
Transcript ID Bladder Kidney Lung
ENST00000295738 2.630±0.00 3.813±0.00 N/A
ENST00000318673 2.326±0.00 N/A 0.586±0.00
ENST00000498327 N/A 1.187±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HY CIL_0001HY_0002 CGP 2:219054420-219160865
CIL_0006EF CIL_0006EF_0001 CGP 2:219075317-219170827
CIL_0006EE CIL_0006EE_0001 CGP 2:219075329-219178106

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088891 slc23a3 solute carrier family 23 (nucleobase transporters), member 3 protein_coding Danio_rerio
ENSMUSG00000026205 Slc23a3 solute carrier family 23 (nucleobase transporters), member 3 protein_coding Mus_musculus

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