C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1, gamma 2 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213983 AP1G2 9606 - 14:23559565-23568070 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308724 AP1G2-002 23559565-23568070 protein_coding
  ENST00000397120 AP1G2-003 23559568-23567803 protein_coding
  ENST00000460049 AP1G2-001 23559608-23567798 retained_intron
  ENST00000465445 AP1G2-005 23559612-23567324 retained_intron
  ENST00000535852 AP1G2-011 23559576-23567465 retained_intron
  ENST00000553629 AP1G2-006 23564980-23567788 retained_intron
  ENST00000553685 AP1G2-029 23566809-23567788 retained_intron
  ENST00000553756 AP1G2-031 23565872-23567783 nonsense_mediated_decay
  ENST00000554069 AP1G2-034 23565931-23567499 retained_intron
  ENST00000554312 AP1G2-021 23565824-23566575 retained_intron
  ENST00000554477 AP1G2-017 23559988-23562406 protein_coding
  ENST00000554554 AP1G2-014 23559568-23563949 retained_intron
  ENST00000554816 AP1G2-033 23567117-23567513 retained_intron
  ENST00000554892 AP1G2-015 23559567-23560311 retained_intron
  ENST00000554977 AP1G2-028 23563619-23564799 retained_intron
  ENST00000554982 AP1G2-027 23562187-23563853 retained_intron
  ENST00000555118 AP1G2-025 23562369-23563791 processed_transcript
  ENST00000555510 AP1G2-023 23561319-23563223 processed_transcript
  ENST00000555789 AP1G2-019 23563473-23564085 retained_intron
  ENST00000555896 AP1G2-008 23565535-23567514 retained_intron
  ENST00000555974 AP1G2-026 23563473-23564091 retained_intron
  ENST00000556152 AP1G2-024 23564035-23564818 retained_intron
  ENST00000556277 AP1G2-035 23564616-23567834 processed_transcript
  ENST00000556741 AP1G2-020 23563477-23564095 retained_intron
  ENST00000556743 AP1G2-007 23564983-23567779 retained_intron
  ENST00000556843 AP1G2-032 23566339-23567747 protein_coding
  ENST00000556943 AP1G2-037 23565121-23567785 nonsense_mediated_decay
  ENST00000556966 AP1G2-022 23561409-23563000 retained_intron
  ENST00000557132 AP1G2-018 23563096-23563743 retained_intron
  ENST00000557162 AP1G2-013 23563252-23564631 nonsense_mediated_decay
  ENST00000557189 AP1G2-036 23565860-23567814 protein_coding
  ENST00000557391 AP1G2-016 23559689-23560452 retained_intron
  ENST00000557482 AP1G2-010 23565812-23567524 retained_intron
  ENST00000557619 AP1G2-030 23565553-23567783 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryPlacentaENST00000397120ENST00000465445ENST00000554554ENST00000555510
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Placenta
ENST00000397120 3.096±0.00 14.834±0.00 1.314±0.00 2.188±0.00 10.477±0.00 8.268±0.00 N/A 7.905±4.39 9.197±2.95
ENST00000465445 N/A N/A N/A N/A 10.591±0.00 N/A N/A 12.248±0.00 N/A
ENST00000554554 N/A N/A N/A N/A N/A 1.535±0.00 N/A N/A N/A
ENST00000555510 N/A N/A N/A N/A N/A N/A 1.668±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0004Z4 CIL_0004Z4_0002 CGP 14:23520855-23560271
CIL_0003BV CIL_0003BV_0001 CGP 14:23559565-23578800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005794 TAS:IEA Golgi apparatus
GO:0005798 IDA Golgi-associated vesicle
GO:0006886 IEA intracellular protein transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016192 IEA:NAS vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030121 TAS AP-1 adaptor complex
GO:0030131 IEA clathrin adaptor complex
GO:0030133 IDA transport vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054337 ap1g2 adaptor-related protein complex 1, gamma 2 subunit protein_coding Danio_rerio
ENSMUSG00000040701 Ap1g2 adaptor protein complex AP-1, gamma 2 subunit protein_coding Mus_musculus

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