C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213983-ENSG00000092051 CGP 9606 14:23559565-23578800
GeneTranscriptPositionBiotype
ENSG00000092051 (JPH4)
junctophilin 4 		ENST00000356300 (JPH4-001) 23568035-23578800 protein_coding
ENST00000397118 (JPH4-002) 23568038-23578785 protein_coding
ENST00000544177 (JPH4-004) 23569415-23573001 protein_coding
ENST00000553505 (JPH4-005) 23574951-23578570 retained_intron
ENST00000622501 (JPH4-201) 23568035-23577457 protein_coding
ENSG00000157306 (THTPA)
thiamine triphosphatase 		ENST00000553985 (THTPA-002) 23512817-23560778 antisense
ENST00000554403 (THTPA-004) 23513349-23544276 retained_intron
ENST00000556354 (THTPA-001) 23511760-23559160 antisense
ENST00000556613 (THTPA-003) 23512772-23514553 retained_intron
ENST00000557568 (THTPA-005) 23513187-23514510 retained_intron
ENSG00000258727 (RP11-66N24.3)
 ENST00000555968 (RP11-66N24.3-001) 23561097-23568073 antisense
ENSG00000259431 (THTPA)
thiamine triphosphatase 		ENST00000288014 (THTPA-001) 23556022-23560271 protein_coding
ENST00000404535 (THTPA-002) 23556007-23559574 protein_coding
ENST00000554789 (THTPA-003) 23556294-23559543 protein_coding
ENST00000554970 (THTPA-008) 23556271-23558898 protein_coding
ENST00000555446 (THTPA-010) 23555988-23558909 processed_transcript
ENST00000556015 (THTPA-007) 23556271-23558859 protein_coding
ENST00000556545 (THTPA-005) 23556999-23558997 protein_coding
ENST00000557630 (THTPA-009) 23556136-23557125 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003BV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040701-ENSMUSG00000022208 CGP 10090 14:55098578-55116935
GeneTranscriptPositionBiotype
ENSMUSG00000022208 (Jph4)
junctophilin 4 		ENSMUST00000022819 (Jph4-001) 55106830-55116935 protein_coding
ENSMUST00000124493 (Jph4-003) 55107277-55115552 protein_coding
ENSMUST00000132992 (Jph4-004) 55109642-55110558 retained_intron
ENSMUST00000133954 (Jph4-002) 55111490-55116580 retained_intron
ENSMUSG00000040701 (Ap1g2)
adaptor protein complex AP-1, gamma 2 subunit 		ENSMUST00000036041 (Ap1g2-001) 55098850-55106593 protein_coding
ENSMUST00000127870 (Ap1g2-002) 55098850-55106548 nonsense_mediated_decay
ENSMUST00000131323 (Ap1g2-004) 55098850-55106267 nonsense_mediated_decay
ENSMUST00000133004 (Ap1g2-005) 55099054-55106132 processed_transcript
ENSMUST00000137481 (Ap1g2-006) 55105706-55106561 retained_intron
ENSMUST00000137548 (Ap1g2-008) 55102350-55104510 retained_intron
ENSMUST00000139536 (Ap1g2-010) 55098850-55099388 retained_intron
ENSMUST00000144197 (Ap1g2-007) 55105925-55106508 processed_transcript
ENSMUST00000151314 (Ap1g2-003) 55098578-55106534 nonsense_mediated_decay
ENSMUST00000153326 (Ap1g2-009) 55100435-55100787 retained_intron
ENSMUST00000153702 (Ap1g2-011) 55102633-55104891 retained_intron
ENSMUST00000170285 (Ap1g2-201) 55098855-55106147 protein_coding
ENSMUSG00000045691 (Thtpa)
thiamine triphosphatase 		ENSMUST00000050575 (Thtpa-001) 55094784-55098986 protein_coding
ENSMUST00000183822 (Thtpa-004) 55053884-55097525 protein_coding
ENSMUST00000183993 (Thtpa-003) 55054957-55097912 processed_transcript
ENSMUST00000185121 (Thtpa-002) 55055493-55098986 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BV_0001ENSG00000092051ENST00000356300ENST00000397118ENST00000544177ENST00000553505ENST00000622501ENSG00000157306ENST00000553985ENST00000554403ENST00000556354ENST00000556613ENST00000557568ENSG00000258727ENST00000555968ENSG00000259431ENST00000288014ENST00000404535ENST00000554789ENST00000554970ENST00000555446ENST00000556015ENST00000556545ENST00000557630CIL_0003BV_0002ENSMUSG00000022208ENSMUST00000022819ENSMUST00000124493ENSMUST00000132992ENSMUST00000133954ENSMUSG00000040701ENSMUST00000036041ENSMUST00000127870ENSMUST00000131323ENSMUST00000133004ENSMUST00000137481ENSMUST00000137548ENSMUST00000139536ENSMUST00000144197ENSMUST00000151314ENSMUST00000153326ENSMUST00000153702ENSMUST00000170285ENSMUSG00000045691ENSMUST00000050575ENSMUST00000183822ENSMUST00000183993ENSMUST00000185121
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BV_0001ENSG00000092051ENST00000356300ENST00000622501ENSG00000157306ENST00000553985ENST00000556354ENSG00000258727ENST00000555968ENSG00000259431ENST00000288014ENST00000404535ENST00000554789CIL_0003BV_0002ENSMUSG00000022208ENSMUST00000022819ENSMUST00000124493ENSMUST00000132992ENSMUST00000133954ENSMUSG00000040701ENSMUST00000036041ENSMUST00000127870ENSMUST00000133004ENSMUST00000151314ENSMUST00000170285ENSMUSG00000045691ENSMUST00000050575
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092051 ENST00000356300 N/A N/A N/A 13.534±2.16 N/A N/A N/A N/A N/A N/A N/A 17.205±0.00 N/A N/A
ENST00000397118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622501 N/A N/A N/A 40.454±30.19 N/A N/A N/A N/A N/A N/A N/A 31.416±15.03 N/A 6.181±0.00
ENSG00000157306 ENST00000553985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A N/A
ENST00000554403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.00 N/A N/A N/A
ENST00000556613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258727 ENST00000555968 2.125±0.00 12.245±0.00 1.508±0.00 N/A 1.358±0.00 1.423±0.00 N/A N/A 1.946±0.38 3.545±2.28 N/A 8.201±2.25 N/A N/A
ENSG00000259431 ENST00000288014 N/A N/A N/A N/A N/A N/A N/A 2.099±0.00 N/A 1.361±0.00 N/A N/A N/A N/A
ENST00000404535 6.146±0.00 N/A N/A N/A 15.946±0.00 12.146±0.00 4.323±2.89 17.333±0.00 5.254±0.00 11.199±0.00 3.635±2.58 N/A 8.428±1.95 15.449±1.62
ENST00000554789 N/A N/A 3.843±0.00 N/A N/A N/A 4.502±0.00 N/A N/A N/A 3.420±0.00 N/A 4.252±0.00 13.277±3.51
ENST00000554970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022208 ENSMUST00000022819 0.966±0.66 0.512±0.16 0.788±0.00 36.012±10.76 0.046±0.03 0.917±0.21 0.057±0.01 0.036±0.02 0.031±0.04 0.041±0.01 0.048±0.02 1.704±0.67 0.125±0.08 1.133±0.63
ENSMUST00000124493 1.012±0.91 1.531±0.68 0.494±0.01 16.800±4.06 0.156±0.04 1.460±0.34 0.055±0.03 0.048±0.02 0.029±0.03 0.095±0.02 0.060±0.02 4.046±1.43 0.083±0.06 1.966±0.39
ENSMUST00000132992 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.148±0.00 N/A
ENSMUST00000133954 0.050±0.01 N/A N/A 8.612±0.27 0.065±0.02 0.634±0.00 0.019±0.00 0.033±0.01 0.011±0.01 N/A N/A 0.300±0.01 0.017±0.00 N/A
ENSMUSG00000040701 ENSMUST00000036041 8.248±1.04 N/A 4.890±0.86 N/A 7.007±1.77 15.524±4.84 1.181±0.00 5.442±0.64 6.484±4.65 4.436±1.12 N/A 6.614±1.79 4.299±2.15 N/A
ENSMUST00000127870 N/A N/A N/A N/A N/A 9.491±0.00 N/A N/A N/A 2.862±0.00 N/A 5.717±2.48 0.980±0.00 N/A
ENSMUST00000131323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133004 N/A N/A N/A N/A 2.735±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151314 4.393±0.29 4.143±0.27 4.882±0.01 N/A 6.015±1.52 10.306±0.75 1.617±0.67 3.970±0.47 2.259±1.22 3.917±0.12 2.658±0.32 6.339±1.81 2.842±0.58 N/A
ENSMUST00000153326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170285 N/A 6.858±1.37 N/A N/A 10.004±3.20 12.334±2.21 1.314±0.12 2.821±0.00 2.454±0.69 N/A N/A 4.979±1.74 3.681±0.00 N/A
ENSMUSG00000045691 ENSMUST00000050575 6.955±1.76 7.442±0.58 4.745±0.73 N/A 5.536±1.20 N/A 3.639±1.07 7.410±0.79 5.643±1.73 5.752±0.54 8.109±0.64 8.119±1.91 2.486±0.87 3.065±1.09
ENSMUST00000183822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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