C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: replication initiator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214022 REPIN1 9606 + 7:150368189-150374044 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397281 REPIN1-201 150368790-150374044 protein_coding
  ENST00000425389 REPIN1-018 150371164-150374039 protein_coding
  ENST00000444957 REPIN1-202 150368790-150374044 protein_coding
  ENST00000466559 REPIN1-004 150368792-150372099 protein_coding
  ENST00000467980 REPIN1-009 150368840-150371632 nonsense_mediated_decay
  ENST00000469309 REPIN1-008 150368845-150370411 retained_intron
  ENST00000473391 REPIN1-005 150368810-150370602 retained_intron
  ENST00000475514 REPIN1-011 150368809-150372162 protein_coding
  ENST00000479668 REPIN1-001 150368272-150374039 protein_coding
  ENST00000482680 REPIN1-006 150368812-150371803 protein_coding
  ENST00000486714 REPIN1-013 150369644-150371655 nonsense_mediated_decay
  ENST00000487455 REPIN1-003 150368229-150370044 retained_intron
  ENST00000488943 REPIN1-012 150368822-150372242 protein_coding
  ENST00000489432 REPIN1-002 150368800-150372945 protein_coding
  ENST00000495535 REPIN1-007 150368826-150370134 retained_intron
  ENST00000518462 REPIN1-019 150369380-150371557 processed_transcript
  ENST00000518514 REPIN1-016 150368871-150371542 protein_coding
  ENST00000519397 REPIN1-014 150368189-150371680 protein_coding
  ENST00000522266 REPIN1-017 150368897-150371392 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397281ENST00000425389ENST00000444957ENST00000473391ENST00000475514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.439±0.00 N/A
ENST00000425389 5.771±0.00 9.155±0.00 0.661±0.00 5.799±4.47 7.376±4.83 3.820±0.00 N/A N/A 6.380±4.66 5.270±0.00 8.521±0.00 14.641±6.85 7.218±2.56 4.307±0.00
ENST00000444957 3.763±0.00 5.081±0.00 0.927±0.00 8.716±0.00 21.244±0.00 33.328±0.00 19.018±0.00 26.580±0.00 16.430±0.00 16.927±0.00 26.879±0.00 21.977±4.39 9.087±1.31 10.018±3.58
ENST00000473391 N/A N/A N/A N/A 3.579±0.00 N/A N/A N/A N/A 0.707±0.00 N/A N/A N/A N/A
ENST00000475514 N/A N/A N/A N/A N/A N/A N/A N/A 1.749±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OE CIL_0004OE_0001 CGP 7:150368189-150412470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005664 TAS nuclear origin of replication recognition complex
GO:0005811 IEA lipid particle
GO:0005829 IEA cytosol
GO:0006260 IEA DNA replication
GO:0022626 IEA cytosolic ribosome
GO:0031965 IEA nuclear membrane
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:2000191 IEA regulation of fatty acid transport
GO:2001273 IEA regulation of glucose import in response to insulin stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000052751 Repin1 replication initiator 1 protein_coding Mus_musculus

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