C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: replication initiator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052751 Repin1 10090 + 6:48593883-48599082 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009420 Repin1-002 48593900-48599081 protein_coding
  ENSMUST00000118229 Repin1-001 48593891-48599082 protein_coding
  ENSMUST00000130896 Repin1-004 48593940-48595333 retained_intron
  ENSMUST00000135151 Repin1-006 48593927-48597206 protein_coding
  ENSMUST00000150030 Repin1-005 48594319-48596623 retained_intron
  ENSMUST00000154010 Repin1-003 48593883-48597387 protein_coding
  ENSMUST00000163452 Repin1-201 48593883-48599081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009420ENSMUST00000118229ENSMUST00000135151ENSMUST00000154010ENSMUST00000163452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009420 3.185±0.93 N/A 4.126±0.00 2.401±0.38 3.591±0.00 3.889±0.00 1.652±0.00 4.677±1.51 3.744±2.47 2.132±0.19 1.936±0.71 6.985±3.62 0.768±0.45 0.840±0.72
ENSMUST00000118229 6.624±1.46 12.970±5.57 10.003±0.96 3.983±2.02 5.145±1.60 5.789±2.58 4.126±0.54 7.832±2.58 8.824±6.73 5.372±1.15 2.742±1.09 17.716±7.61 1.198±0.64 2.061±1.15
ENSMUST00000135151 N/A N/A N/A N/A N/A N/A N/A N/A 4.106±0.00 N/A N/A N/A N/A N/A
ENSMUST00000154010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.712±0.00 N/A
ENSMUST00000163452 5.349±1.71 9.630±0.00 4.344±0.36 6.529±4.31 7.546±0.38 4.667±0.00 1.671±0.27 9.403±2.59 5.730±2.75 2.832±0.81 1.407±0.31 16.419±8.58 1.827±0.97 0.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OE CIL_0004OE_0002 CGP 6:48593883-48623227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005811 IDA lipid particle
GO:0005829 IDA cytosol
GO:0006260 IEA DNA replication
GO:0022626 IDA cytosolic ribosome
GO:0031965 IDA nuclear membrane
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:2000191 IMP regulation of fatty acid transport
GO:2001273 IMP regulation of glucose import in response to insulin stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000214022 REPIN1 replication initiator 1 protein_coding Homo_sapiens

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