C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication initiator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425389 REPIN1-018 ENSG00000214022 9606 + 7:150371164-150374039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000425389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000425389 5.771±0.00 9.155±0.00 0.661±0.00 5.799±4.47 7.376±4.83 3.820±0.00 6.380±4.66 5.270±0.00 8.521±0.00 14.641±6.85 7.218±2.56 4.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OE CIL_0004OE_0001 CGP 7:150368189-150412470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005664 TAS nuclear origin of replication recognition complex
GO:0006260 IEA DNA replication
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163452 Repin1-201 protein_coding Mus_musculus 0 894
ENSMUST00000009420 Repin1-002 protein_coding Mus_musculus 0 894
ENSMUST00000118229 Repin1-001 protein_coding Mus_musculus 0 894
ENSMUST00000154010 Repin1-003 protein_coding Mus_musculus 0 894
ENSMUST00000135151 Repin1-006 protein_coding Mus_musculus 0 856
ENSMUST00000051665 Zfp316-201 protein_coding Mus_musculus 7e-24 117
ENSMUST00000161448 Zfp316-001 protein_coding Mus_musculus 7e-24 117

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