C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication initiator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444957 REPIN1-202 ENSG00000214022 9606 + 7:150368790-150374044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444957 3.763±0.00 5.081±0.00 0.927±0.00 8.716±0.00 21.244±0.00 33.328±0.00 19.018±0.00 26.580±0.00 16.430±0.00 16.927±0.00 26.879±0.00 21.977±4.39 9.087±1.31 10.018±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OE CIL_0004OE_0001 CGP 7:150368189-150412470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005664 TAS nuclear origin of replication recognition complex
GO:0006260 IEA DNA replication
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163452 Repin1-201 protein_coding Mus_musculus 0 1033
ENSMUST00000154010 Repin1-003 protein_coding Mus_musculus 0 1033
ENSMUST00000009420 Repin1-002 protein_coding Mus_musculus 0 894
ENSMUST00000118229 Repin1-001 protein_coding Mus_musculus 0 894
ENSMUST00000135151 Repin1-006 protein_coding Mus_musculus 0 856
ENSMUST00000051665 Zfp316-201 protein_coding Mus_musculus 7e-24 117
ENSMUST00000161448 Zfp316-001 protein_coding Mus_musculus 7e-24 117
ENSMUST00000130896 Repin1-004 retained_intron Mus_musculus 3e-17 95

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