C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-spanning 4-domains, subfamily A, member 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056290 Ms4a4b 10090 + 19:11443553-11463549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035258 Ms4a4b-001 11443573-11463549 protein_coding
  ENSMUST00000123758 Ms4a4b-007 11462489-11463288 retained_intron
  ENSMUST00000136366 Ms4a4b-004 11443553-11458193 retained_intron
  ENSMUST00000142135 Ms4a4b-002 11443558-11458177 retained_intron
  ENSMUST00000144135 Ms4a4b-006 11459266-11463288 processed_transcript
  ENSMUST00000145160 Ms4a4b-003 11443553-11459505 retained_intron
  ENSMUST00000152242 Ms4a4b-005 11461139-11463288 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035258ENSMUST00000123758ENSMUST00000136366ENSMUST00000142135ENSMUST00000144135ENSMUST00000145160ENSMUST00000152242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035258 2.342±0.79 0.413±0.05 1.662±0.10 0.012±0.00 40.158±8.38 0.559±0.24 0.781±0.37 2.958±2.36 0.454±0.33 6.012±0.86 1.054±1.02 0.642±0.40 0.192±0.19 1.982±0.15
ENSMUST00000123758 N/A N/A N/A N/A N/A 0.275±0.00 0.129±0.00 N/A 0.177±0.01 N/A N/A N/A N/A N/A
ENSMUST00000136366 N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A 0.549±0.00 0.106±0.00 N/A
ENSMUST00000142135 0.101±0.00 N/A 0.073±0.00 0.003±0.00 N/A 0.208±0.00 0.045±0.03 N/A 0.044±0.04 0.446±0.00 0.055±0.05 0.029±0.01 0.005±0.00 0.109±0.01
ENSMUST00000144135 N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145160 N/A 0.391±0.00 N/A N/A N/A 0.279±0.00 N/A N/A 0.233±0.15 N/A N/A 0.344±0.17 0.048±0.00 N/A
ENSMUST00000152242 N/A 0.243±0.01 N/A 0.033±0.00 14.627±2.72 0.627±0.44 0.611±0.08 1.064±0.65 0.246±0.10 2.341±0.00 N/A 0.573±0.40 0.084±0.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LI CIL_0002LI_000L CGP 19:11404770-11463549
CIL_0002MR CIL_0002MR_0003 CGP 19:11443553-11482192

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 IDA integral component of plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007018 ms4a17a.6 membrane-spanning 4-domains, subfamily A, member 17A.6 protein_coding Danio_rerio
ENSDARG00000014024 ms4a17a.4 membrane-spanning 4-domains, subfamily A, member 17A.4 protein_coding Danio_rerio
ENSDARG00000020548 si:dkey-77f5.10 si:dkey-77f5.10 protein_coding Danio_rerio
ENSDARG00000028659 ms4a17c.2 membrane-spanning 4-domains, subfamily A, member 17c.2 protein_coding Danio_rerio
ENSDARG00000043796 ms4a17a.7 membrane-spanning 4-domains, subfamily A, member 17A.7 protein_coding Danio_rerio
ENSDARG00000043798 ms4a17a.1 membrane-spanning 4-domains, subfamily A, member 17A.1 protein_coding Danio_rerio
ENSDARG00000043802 ms4a17a.9 membrane-spanning 4-domains, subfamily A, member 17A.9 protein_coding Danio_rerio
ENSDARG00000053561 ms4a17a.11 membrane-spanning 4-domains, subfamily A, member 17A.11 protein_coding Danio_rerio
ENSDARG00000053563 si:ch73-56d11.4 si:ch73-56d11.4 protein_coding Danio_rerio
ENSDARG00000054898 ms4a17a.17 membrane-spanning 4-domains, subfamily A, member 17A.17 protein_coding Danio_rerio
ENSDARG00000091970 ms4a17a.3 membrane-spanning 4-domains, subfamily A, member 17A.3 protein_coding Danio_rerio
ENSDARG00000092204 ms4a17a.5 membrane-spanning 4-domains, subfamily A, member 17A.5 protein_coding Danio_rerio
ENSDARG00000092593 si:dkey-174k12.3 si:dkey-174k12.3 protein_coding Danio_rerio
ENSDARG00000093512 si:dkey-238j22.1 si:dkey-238j22.1 protein_coding Danio_rerio
ENSDARG00000093546 ms4a17a.2 membrane-spanning 4-domains, subfamily A, member 17a.2 protein_coding Danio_rerio
ENSDARG00000093910 FP015791.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094643 ms4a17c.1 membrane-spanning 4-domains, subfamily A, member 17C.1 protein_coding Danio_rerio
ENSDARG00000094809 ms4a17a.14 membrane-spanning 4-domains, subfamily A, member 17A.14 protein_coding Danio_rerio
ENSDARG00000094854 ms4a17a.8 membrane-spanning 4-domains, subfamily A, member 17A.8 protein_coding Danio_rerio
ENSDARG00000095695 ms4a17a.10 membrane-spanning 4-domains, subfamily A, member 17A.10 protein_coding Danio_rerio
ENSDARG00000097527 si:ch73-56d11.3 si:ch73-56d11.3 protein_coding Danio_rerio
ENSG00000110079 MS4A4A membrane-spanning 4-domains, subfamily A, member 4A protein_coding Homo_sapiens
ENSG00000214787 MS4A4E membrane-spanning 4-domains, subfamily A, member 4E protein_coding Homo_sapiens

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