C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SKI family transcriptional corepressor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215474 SKOR2 9606 - 18:47212089-47249183 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000400404 SKOR2-001 47231123-47249183 protein_coding
  ENST00000425639 SKOR2-002 47219922-47249183 protein_coding
  ENST00000620245 SKOR2-201 47212089-47249183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalTestisENST00000400404ENST00000425639ENST00000620245
Transcript ID Adrenal Testis
ENST00000400404 N/A 1.638±0.00
ENST00000425639 0.012±0.00 0.854±0.00
ENST00000620245 N/A 0.685±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0001 VISTA 18:46943900-47544913

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 ISS transcription corepressor activity
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0021587 IEA cerebellum morphogenesis
GO:0021702 IEA cerebellar Purkinje cell differentiation
GO:0021936 IEA regulation of cerebellar granule cell precursor proliferation
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 IEA negative regulation of BMP signaling pathway
GO:0042826 IEA histone deacetylase binding
GO:0045880 IEA positive regulation of smoothened signaling pathway
GO:0046332 IPI:IEA SMAD binding
GO:0048814 IEA regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000091519 Skor2 SKI family transcriptional corepressor 2 protein_coding Mus_musculus

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