C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SKI family transcriptional corepressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620245 SKOR2-201 ENSG00000215474 9606 - 18:47212089-47249183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000620245
Transcript ID Testis
ENST00000620245 0.685±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0001 VISTA 18:46943900-47544913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IEA transcription corepressor activity
GO:0005634 IEA nucleus
GO:0021587 IEA cerebellum morphogenesis
GO:0021702 IEA cerebellar Purkinje cell differentiation
GO:0021936 IEA regulation of cerebellar granule cell precursor proliferation
GO:0030514 IEA negative regulation of BMP signaling pathway
GO:0042826 IEA histone deacetylase binding
GO:0045880 IEA positive regulation of smoothened signaling pathway
GO:0046332 IEA SMAD binding
GO:0048814 IEA regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166956 Skor2-201 protein_coding Mus_musculus 0 3299
ENSDART00000100104 skor1a-001 protein_coding Danio_rerio 0 431

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