C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SKI family transcriptional corepressor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400404 SKOR2-001 ENSG00000215474 9606 - 18:47231123-47249183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000400404
Transcript ID Testis
ENST00000400404 1.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0001 VISTA 18:46943900-47544913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 ISS transcription corepressor activity
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0046332 IPI:IEA SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166956 Skor2-201 protein_coding Mus_musculus 0 1018
ENSDART00000100104 skor1a-001 protein_coding Danio_rerio 0 431

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