C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: presequence translocase-associated motor 16 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000217930 PAM16 9606 - 16:4331549-4355607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318059 PAM16-001 4340248-4351372 protein_coding
  ENST00000571178 PAM16-004 4340318-4351293 nonsense_mediated_decay
  ENST00000571819 PAM16-008 4341652-4343693 processed_transcript
  ENST00000571941 PAM16-012 4340251-4345904 protein_coding
  ENST00000571986 PAM16-010 4340251-4351315 nonsense_mediated_decay
  ENST00000573236 PAM16-016 4340249-4343550 retained_intron
  ENST00000573450 PAM16-009 4340251-4343624 processed_transcript
  ENST00000573553 PAM16-015 4340251-4343761 protein_coding
  ENST00000573614 PAM16-013 4340251-4351270 processed_transcript
  ENST00000575636 PAM16-006 4340251-4351055 nonsense_mediated_decay
  ENST00000575848 PAM16-014 4340251-4344133 protein_coding
  ENST00000575884 PAM16-011 4345290-4345978 processed_transcript
  ENST00000575942 PAM16-003 4345290-4351320 processed_transcript
  ENST00000576217 PAM16-002 4340251-4355607 protein_coding
  ENST00000577031 PAM16-005 4331549-4351265 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318059ENST00000571178ENST00000575848ENST00000576217ENST00000577031
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318059 N/A N/A N/A 5.509±3.08 N/A 2.641±0.00 2.148±0.00 14.534±11.92 N/A N/A N/A
ENST00000571178 N/A N/A N/A N/A N/A 14.206±0.00 N/A N/A 109.491±0.00 36.022±0.00 114.263±0.00
ENST00000575848 N/A 3.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576217 10.403±0.00 N/A 9.807±0.00 10.561±0.00 N/A 16.814±0.00 N/A 11.945±8.46 31.296±0.00 29.305±5.77 32.361±0.00
ENST00000577031 N/A N/A N/A N/A 3.383±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WQ CIL_0000WQ_0001 CGP 16:4257186-4339597
CIL_00009U CIL_00009U_0001 CGP 16:4314761-4355607
CIL_00009Y CIL_00009Y_0001 CGP 16:4331549-4420494

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005744 IEA mitochondrial inner membrane presequence translocase complex
GO:0006626 TAS protein targeting to mitochondrion
GO:0030150 IEA protein import into mitochondrial matrix
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037356 pam16 presequence translocase-associated motor 16 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000014301 Pam16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) protein_coding Mus_musculus
ENSMUSG00000045886 Gm9803 predicted gene 9803 protein_coding Mus_musculus

Loading