C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014301 Pam16 10090 - 16:4616464-4624988 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000014445 Pam16-001 4616464-4624988 protein_coding
  ENSMUST00000131250 Pam16-004 4616464-4616988 retained_intron
  ENSMUST00000139534 Pam16-002 4616602-4618154 retained_intron
  ENSMUST00000156889 Pam16-003 4616464-4624936 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000014445ENSMUST00000131250ENSMUST00000156889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000014445 31.461±0.12 58.317±8.76 39.408±5.65 53.583±27.17 38.941±4.13 30.849±6.94 37.641±9.04 39.441±17.83 47.659±2.45 58.285±13.26 23.967±7.91 124.724±38.62
ENSMUST00000131250 N/A N/A N/A 20.592±0.00 N/A N/A N/A N/A N/A N/A 21.760±0.00 N/A
ENSMUST00000156889 N/A N/A N/A 26.720±0.00 N/A 63.697±10.02 N/A 16.774±0.90 N/A 115.597±0.00 20.454±1.87 65.942±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WQ CIL_0000WQ_0002 CGP 16:4544661-4624924
CIL_00009U CIL_00009U_0002 CGP 16:4594713-4624988
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005744 IEA mitochondrial inner membrane presequence translocase complex
GO:0030150 IEA protein import into mitochondrial matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037356 pam16 presequence translocase-associated motor 16 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000217930 PAM16 presequence translocase-associated motor 16 homolog (S. cerevisiae) protein_coding Homo_sapiens

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