C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: early B-cell factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221818 EBF2 9606 - 8:25841730-26045397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000408929 EBF2-002 25844362-26041488 protein_coding
  ENST00000517825 EBF2-003 26031450-26045178 retained_intron
  ENST00000520164 EBF2-001 25841730-26045397 protein_coding
  ENST00000535548 EBF2-201 25844609-25887916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408929ENST00000517825ENST00000520164ENST00000535548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408929 N/A N/A N/A 0.007±0.00 0.414±0.00 N/A N/A N/A N/A N/A N/A 0.268±0.10 0.010±0.00 N/A
ENST00000517825 N/A N/A N/A N/A 0.593±0.00 0.603±0.00 N/A N/A 0.716±0.71 0.116±0.00 N/A 0.297±0.15 0.025±0.00 N/A
ENST00000520164 4.795±0.00 3.968±0.00 0.260±0.00 0.027±0.01 2.409±1.81 0.968±0.48 1.738±0.77 0.435±0.00 1.762±0.00 0.117±0.03 0.924±0.35 0.165±0.05 0.052±0.03 1.221±0.73
ENST00000535548 N/A N/A 0.225±0.00 0.085±0.00 N/A N/A N/A N/A N/A 1.012±0.00 0.446±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UM CIL_0007UM_0001 VISTA 8:25617644-26219153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001709 IEA cell fate determination
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0035563 IEA positive regulation of chromatin binding
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity
GO:0050873 IEA brown fat cell differentiation
GO:0060612 IEA adipose tissue development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042525 coe2 coe2 protein_coding Danio_rerio
ENSMUSG00000022053 Ebf2 early B cell factor 2 protein_coding Mus_musculus

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