C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007UM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs231 VISTA 9606 8:25617644-26219153
GeneTranscriptPositionBiotype
ENSG00000221818 (EBF2)
early B-cell factor 2 		ENST00000408929 (EBF2-002) 25844362-26041488 protein_coding
ENST00000517825 (EBF2-003) 26031450-26045178 retained_intron
ENST00000520164 (EBF2-001) 25841730-26045397 protein_coding
ENST00000535548 (EBF2-201) 25844609-25887916 protein_coding
ENSG00000253100 (RP11-219J21.1)
 ENST00000517964 (RP11-219J21.1-001) 25685798-25687524 lincRNA
ENSG00000253342 (RP11-219J21.2)
 ENST00000522524 (RP11-219J21.2-001) 25776679-25777456 lincRNA
ENSG00000254178 (RP11-299D14.2)
 ENST00000520386 (RP11-299D14.2-001) 25834129-25840135 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007UM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs231 VISTA 10090 14:67061024-67662564
GeneTranscriptPositionBiotype
ENSMUSG00000022052 (Ppp2r2a)
protein phosphatase 2, regulatory subunit B, alpha 		ENSMUST00000089230 (Ppp2r2a-201) 67014057-67072471 protein_coding
ENSMUSG00000022053 (Ebf2)
early B cell factor 2 		ENSMUST00000022637 (Ebf2-001) 67233292-67429777 protein_coding
ENSMUST00000176029 (Ebf2-004) 67234644-67428687 protein_coding
ENSMUST00000176161 (Ebf2-003) 67233586-67430918 protein_coding
ENSMUST00000177231 (Ebf2-002) 67233603-67236513 retained_intron
ENSMUSG00000075549 (Gm6878)
predicted gene 6878 		ENSMUST00000100448 (Gm6878-001) 67304888-67314711 protein_coding
ENSMUSG00000093386 (1700120O09Rik)
RIKEN cDNA 1700120O09 gene 		ENSMUST00000177127 (1700120O09Rik-001) 67324894-67335928 processed_transcript
ENSMUSG00000093472 (4930438E09Rik)
RIKEN cDNA 4930438E09 gene 		ENSMUST00000176841 (4930438E09Rik-001) 67332042-67397742 processed_transcript
ENSMUSG00000093634 (Gm10860)
predicted gene 10860 		ENSMUST00000176934 (Gm10860-001) 67427668-67437171 processed_transcript
ENSMUSG00000093744 (Gm20675)
predicted gene 20675 		ENSMUST00000175861 (Gm20675-001) 67232437-67233129 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UM_0001ENSG00000221818ENST00000408929ENST00000517825ENST00000520164ENST00000535548ENSG00000253100ENST00000517964ENSG00000253342ENST00000522524ENSG00000254178ENST00000520386CIL_0007UM_0002ENSMUSG00000022052ENSMUST00000089230ENSMUSG00000022053ENSMUST00000022637ENSMUST00000176029ENSMUST00000176161ENSMUST00000177231ENSMUSG00000075549ENSMUST00000100448ENSMUSG00000093386ENSMUST00000177127ENSMUSG00000093472ENSMUST00000176841ENSMUSG00000093634ENSMUST00000176934ENSMUSG00000093744ENSMUST00000175861
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UM_0001ENSG00000221818ENST00000408929ENST00000517825ENST00000520164ENST00000535548ENSG00000253100ENST00000517964ENSG00000253342ENST00000522524ENSG00000254178ENST00000520386CIL_0007UM_0002ENSMUSG00000022052ENSMUST00000089230ENSMUSG00000022053ENSMUST00000022637ENSMUST00000176029ENSMUST00000176161ENSMUST00000177231ENSMUSG00000075549ENSMUST00000100448ENSMUSG00000093386ENSMUST00000177127ENSMUSG00000093472ENSMUST00000176841ENSMUSG00000093634ENSMUST00000176934ENSMUSG00000093744ENSMUST00000175861
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000221818 ENST00000408929 N/A N/A N/A 0.007±0.00 0.414±0.00 N/A N/A N/A N/A N/A N/A 0.268±0.10 0.010±0.00 N/A
ENST00000517825 N/A N/A N/A N/A 0.593±0.00 0.603±0.00 N/A N/A 0.716±0.71 0.116±0.00 N/A 0.297±0.15 0.025±0.00 N/A
ENST00000520164 4.795±0.00 3.968±0.00 0.260±0.00 0.027±0.01 2.409±1.81 0.968±0.48 1.738±0.77 0.435±0.00 1.762±0.00 0.117±0.03 0.924±0.35 0.165±0.05 0.052±0.03 1.221±0.73
ENST00000535548 N/A N/A 0.225±0.00 0.085±0.00 N/A N/A N/A N/A N/A 1.012±0.00 0.446±0.00 N/A N/A N/A
ENSG00000253100 ENST00000517964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.803±2.83
ENSG00000253342 ENST00000522524 N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.11
ENSG00000254178 ENST00000520386 N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022052 ENSMUST00000089230 8.026±1.20 77.537±10.52 6.229±0.44 13.425±0.79 12.717±5.70 10.343±1.37 6.203±0.66 6.324±1.35 3.989±1.54 11.304±1.44 7.585±2.46 21.065±9.03 13.035±3.97 6.876±0.84
ENSMUSG00000022053 ENSMUST00000022637 N/A 0.375±0.00 N/A N/A 0.602±0.00 0.048±0.01 N/A N/A N/A 0.073±0.00 N/A 0.062±0.04 N/A N/A
ENSMUST00000176029 2.231±0.72 0.819±0.19 N/A N/A 2.216±0.62 0.195±0.09 0.632±0.10 0.217±0.10 N/A 0.177±0.11 N/A 0.153±0.06 0.060±0.01 0.381±0.20
ENSMUST00000176161 N/A 0.207±0.07 N/A 1.405±1.35 N/A 0.047±0.01 1.031±0.00 0.229±0.02 0.017±0.00 0.088±0.00 0.111±0.00 0.118±0.14 0.077±0.02 0.125±0.00
ENSMUST00000177231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.03 N/A N/A
ENSMUSG00000075549 ENSMUST00000100448 0.028±0.01 0.080±0.03 0.012±0.00 N/A 0.081±0.03 N/A 0.025±0.01 0.127±0.08 0.006±0.00 N/A N/A 0.050±0.04 0.021±0.02 0.119±0.03
ENSMUSG00000093386 ENSMUST00000177127 0.039±0.01 0.095±0.00 0.023±0.01 0.180±0.00 0.176±0.06 N/A 0.071±0.03 N/A 0.011±0.00 0.044±0.00 N/A N/A 0.011±0.00 1.383±0.24
ENSMUSG00000093472 ENSMUST00000176841 0.143±0.00 N/A N/A 0.074±0.00 0.171±0.07 N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 1.567±0.93
ENSMUSG00000093634 ENSMUST00000176934 N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.06 N/A N/A 0.005±0.00 0.074±0.03 0.516±0.28
ENSMUSG00000093744 ENSMUST00000175861 0.583±0.18 0.368±0.00 N/A 0.128±0.00 0.366±0.06 N/A N/A N/A N/A N/A 0.240±0.00 N/A 0.030±0.00 N/A

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