C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: early B cell factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022053 Ebf2 10090 + 14:67233292-67430918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022637 Ebf2-001 67233292-67429777 protein_coding
  ENSMUST00000176029 Ebf2-004 67234644-67428687 protein_coding
  ENSMUST00000176161 Ebf2-003 67233586-67430918 protein_coding
  ENSMUST00000177231 Ebf2-002 67233603-67236513 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022637ENSMUST00000176029ENSMUST00000176161ENSMUST00000177231
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022637 N/A 0.375±0.00 N/A 0.602±0.00 0.048±0.01 N/A N/A N/A 0.073±0.00 N/A 0.062±0.04 N/A N/A
ENSMUST00000176029 2.231±0.72 0.819±0.19 N/A 2.216±0.62 0.195±0.09 0.632±0.10 0.217±0.10 N/A 0.177±0.11 N/A 0.153±0.06 0.060±0.01 0.381±0.20
ENSMUST00000176161 N/A 0.207±0.07 1.405±1.35 N/A 0.047±0.01 1.031±0.00 0.229±0.02 0.017±0.00 0.088±0.00 0.111±0.00 0.118±0.14 0.077±0.02 0.125±0.00
ENSMUST00000177231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.03 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MZ CIL_0007MZ_0002 UCNEbase 14:67015990-67383923
CIL_0007UM CIL_0007UM_0002 VISTA 14:67061024-67662564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001709 IDA cell fate determination
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0035563 IDA positive regulation of chromatin binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity
GO:0050873 IDA brown fat cell differentiation
GO:0060612 IMP adipose tissue development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042525 coe2 coe2 protein_coding Danio_rerio
ENSG00000221818 EBF2 early B-cell factor 2 protein_coding Homo_sapiens

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