C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221829 FANCG 9606 - 9:35073835-35080016 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378643 FANCG-001 35073838-35080016 protein_coding
  ENST00000425676 FANCG-005 35073835-35079693 nonsense_mediated_decay
  ENST00000448890 FANCG-003 35077265-35079942 protein_coding
  ENST00000461149 FANCG-007 35077998-35078646 retained_intron
  ENST00000462124 FANCG-004 35078602-35079669 retained_intron
  ENST00000474894 FANCG-006 35076141-35076852 retained_intron
  ENST00000476212 FANCG-002 35073839-35076565 processed_transcript
  ENST00000481254 FANCG-008 35074779-35075509 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378643ENST00000425676ENST00000476212ENST00000481254
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378643 N/A 1.217±0.00 0.078±0.00 0.416±0.00 1.575±0.00 0.570±0.00 2.472±0.00 0.204±0.07 2.162±0.00 0.505±0.00 4.666±0.65 2.438±0.72 3.614±0.01
ENST00000425676 0.434±0.00 1.632±0.00 1.048±0.27 1.284±0.00 0.806±0.63 0.154±0.00 0.317±0.00 0.390±0.00 N/A N/A 3.487±2.01 2.515±0.00 N/A
ENST00000476212 N/A N/A N/A N/A 2.646±0.00 N/A N/A 0.320±0.00 N/A 1.084±0.00 N/A N/A N/A
ENST00000481254 N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A 3.847±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SF CIL_0005SF_0001 CGP 9:35056064-35080016
CIL_0005SE CIL_0005SE_0001 CGP 9:35073835-35096601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000075 TAS cell cycle checkpoint
GO:0000160 IEA phosphorelay signal transduction system
GO:0001541 IEA ovarian follicle development
GO:0003684 TAS damaged DNA binding
GO:0004871 IEA signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0006281 TAS DNA repair
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007005 IMP mitochondrion organization
GO:0007286 IEA spermatid development
GO:0009314 IEA response to radiation
GO:0043240 IDA Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024967 fancg Fanconi anemia, complementation group G protein_coding Danio_rerio
ENSMUSG00000028453 Fancg Fanconi anemia, complementation group G protein_coding Mus_musculus

Loading