C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028453 Fancg 10090 - 4:43002343-43010506 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030165 Fancg-001 43002343-43010355 protein_coding
  ENSMUST00000123332 Fancg-002 43002343-43010488 retained_intron
  ENSMUST00000124645 Fancg-006 43003011-43006466 processed_transcript
  ENSMUST00000125570 Fancg-008 43003913-43006779 processed_transcript
  ENSMUST00000127067 Fancg-010 43003260-43006511 processed_transcript
  ENSMUST00000132273 Fancg-003 43010043-43010506 processed_transcript
  ENSMUST00000133915 Fancg-009 43009158-43010222 retained_intron
  ENSMUST00000134083 Fancg-005 43005221-43009153 processed_transcript
  ENSMUST00000135362 Fancg-004 43009067-43010170 retained_intron
  ENSMUST00000148018 Fancg-007 43002922-43003932 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030165ENSMUST00000123332ENSMUST00000124645ENSMUST00000125570ENSMUST00000127067ENSMUST00000134083ENSMUST00000135362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030165 2.724±0.75 1.692±0.66 2.776±0.50 3.457±2.58 2.771±0.49 2.931±0.77 0.708±0.37 1.706±0.20 2.403±2.02 2.250±0.30 0.394±0.08 1.837±0.82 3.210±1.09 14.948±0.40
ENSMUST00000123332 N/A 0.507±0.13 0.789±0.11 4.544±0.00 1.031±0.17 1.010±0.21 N/A 0.407±0.00 1.033±0.01 0.714±0.00 0.221±0.06 0.733±0.19 0.447±0.23 10.922±0.44
ENSMUST00000124645 N/A 2.174±0.00 N/A 2.380±0.00 N/A N/A N/A N/A N/A N/A 0.598±0.00 4.128±0.89 0.940±0.00 8.004±0.00
ENSMUST00000125570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A N/A
ENSMUST00000127067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A 2.092±0.64 N/A
ENSMUST00000134083 N/A N/A N/A N/A 4.071±0.93 2.746±0.00 N/A N/A 0.650±0.00 3.052±0.00 0.177±0.00 2.369±0.00 N/A N/A
ENSMUST00000135362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.534±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SF CIL_0005SF_0002 CGP 4:42979963-43010506
CIL_0005SE CIL_0005SE_0002 CGP 4:43002343-43025819

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006281 IEA DNA repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007005 IEA mitochondrion organization
GO:0007286 IMP spermatid development
GO:0009314 IMP response to radiation
GO:0043240 ISS Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024967 fancg Fanconi anemia, complementation group G protein_coding Danio_rerio
ENSG00000221829 FANCG Fanconi anemia, complementation group G protein_coding Homo_sapiens

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