C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 880
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221923 ZNF880 9606 + 19:52369917-52385795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344085 ZNF880-002 52369939-52374717 protein_coding
  ENST00000422689 ZNF880-001 52369951-52385795 protein_coding
  ENST00000424032 ZNF880-003 52369917-52383969 protein_coding
  ENST00000595099 ZNF880-006 52370093-52373151 processed_transcript
  ENST00000597976 ZNF880-004 52369946-52374630 protein_coding
  ENST00000600321 ZNF880-005 52369936-52380075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344085ENST00000422689ENST00000424032ENST00000597976ENST00000600321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344085 N/A N/A N/A N/A 2.502±0.00 N/A N/A N/A 0.361±0.00 2.844±0.00 N/A N/A N/A 1.834±0.00
ENST00000422689 2.274±0.00 0.632±0.00 0.593±0.00 1.785±0.14 N/A 1.539±0.85 1.693±1.36 1.307±0.62 1.036±0.99 2.376±0.57 0.368±0.33 0.890±0.69 0.853±0.00 0.548±0.00
ENST00000424032 N/A N/A N/A N/A N/A N/A N/A N/A 2.253±0.00 N/A 1.455±0.00 0.227±0.00 2.480±0.00 1.452±0.00
ENST00000597976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.033±0.00
ENST00000600321 1.806±0.00 2.146±0.00 N/A N/A 0.965±0.00 N/A N/A 1.892±0.00 0.166±0.00 2.154±0.00 N/A 2.261±1.51 4.260±0.00 1.797±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0001 CGP 19:52336245-52385795

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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