C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ceramide synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623882 CERS1-005 ENSG00000223802 9606 - 19:18868545-18896096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaENST00000623882
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000623882 0.112±0.00 0.112±0.00 34.390±0.00 0.353±0.00 0.441±0.34 0.226±0.00 0.076±0.00 1.104±1.04 0.525±0.00 0.141±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GF CIL_0003GF_0001 CGP 19:18868545-18896727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006665 TAS sphingolipid metabolic process
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process
GO:0035690 IDA cellular response to drug
GO:0036146 IDA cellular response to mycotoxin
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0046513 ISS ceramide biosynthetic process
GO:0050291 ISS sphingosine N-acyltransferase activity
GO:0051974 IDA negative regulation of telomerase activity
GO:0071492 IDA cellular response to UV-A
GO:0072721 IDA cellular response to dithiothreitol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165819 Cers1-201 protein_coding Mus_musculus 0 802
ENSMUST00000140239 Cers1-001 protein_coding Mus_musculus 0 802
ENSMUST00000046516 Gdf1-001 protein_coding Mus_musculus 0 431

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