C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2bn
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000233822 HIST1H2BN 9606 + 6:27837760-27865798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396980 HIST1H2BN-201 27838662-27865798 protein_coding
  ENST00000449538 HIST1H2BN-002 27838545-27852204 nonsense_mediated_decay
  ENST00000606613 HIST1H2BN-003 27838601-27855709 protein_coding
  ENST00000612898 HIST1H2BN-001 27837760-27839482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396980ENST00000449538ENST00000606613ENST00000612898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396980 N/A N/A 0.217±0.00 1.572±0.00 3.169±0.00 N/A N/A N/A N/A N/A N/A 0.757±0.00 0.243±0.00 N/A
ENST00000449538 N/A N/A N/A N/A 0.328±0.00 2.358±2.18 0.220±0.00 2.906±0.00 N/A N/A 0.199±0.00 4.272±3.90 0.145±0.07 N/A
ENST00000606613 0.097±0.00 0.156±0.00 0.031±0.00 0.164±0.00 0.102±0.00 0.052±0.00 0.007±0.00 0.143±0.00 0.086±0.02 0.182±0.00 0.066±0.02 0.076±0.03 0.052±0.02 0.056±0.00
ENST00000612898 N/A 0.379±0.00 N/A 0.776±0.00 N/A 0.064±0.00 N/A N/A 0.174±0.12 0.364±0.10 0.389±0.00 N/A 0.063±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_0008 CGP 6:27837760-27865798

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0003677 NAS:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio

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