C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L36a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000241343 RPL36A 9606 + X:101390824-101396154 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372849 RPL36A-007 101391016-101395786 nonsense_mediated_decay
  ENST00000392994 RPL36A-004 101390989-101395793 protein_coding
  ENST00000427805 RPL36A-002 101390824-101396117 protein_coding
  ENST00000465340 RPL36A-003 101391011-101393852 retained_intron
  ENST00000465744 RPL36A-010 101391114-101395795 retained_intron
  ENST00000471855 RPL36A-001 101391202-101395795 protein_coding
  ENST00000489407 RPL36A-011 101395153-101395795 retained_intron
  ENST00000491851 RPL36A-008 101391011-101391969 retained_intron
  ENST00000553110 RPL36A-012 101390983-101395795 protein_coding
  ENST00000614077 RPL36A-201 101390890-101396154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427805ENST00000553110ENST00000614077
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427805 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.635±0.00 N/A N/A N/A
ENST00000553110 252.375±0.00 389.445±0.00 96.088±0.00 121.187±64.68 444.633±0.00 83.731±0.00 94.672±54.44 58.673±27.83 310.109±0.00 246.502±0.00 758.636±508.78 496.832±104.02 162.874±60.15
ENST00000614077 N/A N/A 34.489±0.00 32.204±0.00 37.773±0.00 7.200±0.00 9.122±0.00 25.645±0.00 31.836±0.00 N/A 40.181±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DV CIL_0000DV_0001 CGP X:101349447-101396154

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002181 IC cytoplasmic translation
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058105 rpl36a ribosomal protein L36A protein_coding Danio_rerio
ENSMUSG00000079435 Rpl36a ribosomal protein L36A protein_coding Mus_musculus

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