C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L36A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079435 Rpl36a 10090 + X:134585654-134588062 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113211 Rpl36a-001 134585654-134588056 protein_coding
  ENSMUST00000149857 Rpl36a-005 134585701-134588033 retained_intron
  ENSMUST00000152266 Rpl36a-002 134587081-134587996 retained_intron
  ENSMUST00000169457 Rpl36a-006 134586090-134587016 retained_intron
  ENSMUST00000170828 Rpl36a-004 134585690-134588062 nonsense_mediated_decay
  ENSMUST00000172023 Rpl36a-003 134585689-134588062 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113211ENSMUST00000172023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113211 95.947±25.88 6.792±0.69 651.735±33.96 242.993±75.18 80.056±33.93 77.789±32.69 59.326±2.44 107.374±19.20 506.851±503.94 75.499±13.66 125.369±11.13 230.067±244.01 430.096±186.13 17.053±2.35
ENSMUST00000172023 10.780±0.43 1.647±0.48 N/A N/A 3.793±0.00 4.823±0.55 N/A N/A 3.376±0.00 N/A N/A 8.393±1.60 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DV CIL_0000DV_0002 CGP X:134542336-134588062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058105 rpl36a ribosomal protein L36A protein_coding Danio_rerio
ENSG00000241343 RPL36A ribosomal protein L36a protein_coding Homo_sapiens

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