C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000010671-ENSG00000241343 CGP 9606 X:101349447-101396154
GeneTranscriptPositionBiotype
ENSG00000010671 (BTK)
Bruton agammaglobulinemia tyrosine kinase 		ENST00000308731 (BTK-006) 101349450-101386195 protein_coding
ENST00000372880 (BTK-201) 101349447-101386224 protein_coding
ENST00000464006 (BTK-003) 101362191-101362815 processed_transcript
ENST00000464567 (BTK-004) 101374306-101386148 processed_transcript
ENST00000470069 (BTK-008) 101353043-101353984 processed_transcript
ENST00000470329 (BTK-002) 101356511-101358361 retained_intron
ENST00000478995 (BTK-001) 101355585-101356804 retained_intron
ENST00000488970 (BTK-005) 101353319-101354221 processed_transcript
ENST00000618050 (BTK-202) 101349447-101375284 protein_coding
ENST00000621635 (BTK-203) 101349447-101390796 protein_coding
ENSG00000257529 (RPL36A-HNRNPH2)
RPL36A-HNRNPH2 readthrough 		ENST00000409170 (RPL36A-HNRNPH2-002) 101391012-101412165 protein_coding
ENST00000409338 (RPL36A-HNRNPH2-001) 101391011-101412297 protein_coding
CIL_0000DV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031264-ENSMUSG00000079435 CGP 10090 X:134542336-134588062
GeneTranscriptPositionBiotype
ENSMUSG00000031264 (Btk)
Bruton agammaglobulinemia tyrosine kinase 		ENSMUST00000033617 (Btk-001) 134542336-134583140 protein_coding
ENSMUST00000113213 (Btk-002) 134542370-134583128 protein_coding
ENSMUST00000128333 (Btk-003) 134573209-134583570 processed_transcript
ENSMUST00000132664 (Btk-005) 134549221-134583140 retained_intron
ENSMUST00000150245 (Btk-004) 134568905-134582473 processed_transcript
ENSMUSG00000079435 (Rpl36a)
ribosomal protein L36A 		ENSMUST00000113211 (Rpl36a-001) 134585654-134588056 protein_coding
ENSMUST00000149857 (Rpl36a-005) 134585701-134588033 retained_intron
ENSMUST00000152266 (Rpl36a-002) 134587081-134587996 retained_intron
ENSMUST00000169457 (Rpl36a-006) 134586090-134587016 retained_intron
ENSMUST00000170828 (Rpl36a-004) 134585690-134588062 nonsense_mediated_decay
ENSMUST00000172023 (Rpl36a-003) 134585689-134588062 retained_intron
ENSMUSG00000083687 (Gm15154)
predicted gene 15154 		ENSMUST00000117590 (Gm15154-001) 134551882-134552247 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DV_0001ENSG00000010671ENST00000308731ENST00000372880ENST00000464006ENST00000464567ENST00000470069ENST00000470329ENST00000478995ENST00000488970ENST00000618050ENST00000621635ENSG00000257529ENST00000409170ENST00000409338CIL_0000DV_0002ENSMUSG00000031264ENSMUST00000033617ENSMUST00000113213ENSMUST00000128333ENSMUST00000132664ENSMUST00000150245ENSMUSG00000079435ENSMUST00000113211ENSMUST00000149857ENSMUST00000152266ENSMUST00000169457ENSMUST00000170828ENSMUST00000172023ENSMUSG00000083687ENSMUST00000117590
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DV_0001ENSG00000010671ENST00000308731ENST00000618050ENST00000621635ENSG00000257529ENST00000409170CIL_0000DV_0002ENSMUSG00000031264ENSMUST00000033617ENSMUST00000113213ENSMUST00000128333ENSMUST00000132664ENSMUSG00000079435ENSMUST00000113211ENSMUST00000172023ENSMUSG00000083687ENSMUST00000117590
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000010671 ENST00000308731 0.332±0.00 N/A N/A 0.351±0.00 N/A 0.263±0.14 0.488±0.00 0.838±0.00 0.519±0.00 1.387±0.77 N/A 0.653±0.29 1.771±0.76 N/A
ENST00000372880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618050 0.638±0.00 6.223±0.00 N/A 0.349±0.00 1.356±0.00 0.389±0.00 0.380±0.00 0.278±0.00 N/A 2.170±0.64 N/A 0.581±0.44 1.026±0.61 1.043±0.38
ENST00000621635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENSG00000257529 ENST00000409170 N/A N/A N/A N/A N/A 20.349±0.00 10.259±0.00 N/A 14.503±0.00 N/A 21.809±0.00 40.063±0.00 N/A N/A
ENST00000409338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031264 ENSMUST00000033617 0.666±0.09 0.180±0.10 1.072±0.26 0.100±0.04 2.249±1.08 0.334±0.11 0.267±0.08 0.227±0.11 3.503±3.69 1.066±0.47 0.170±0.18 0.466±0.40 0.392±0.13 0.126±0.02
ENSMUST00000113213 N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A 0.113±0.00 0.166±0.01 N/A N/A
ENSMUST00000128333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.791±0.38 N/A
ENSMUST00000132664 N/A 0.347±0.00 N/A 0.048±0.00 1.552±0.00 0.282±0.14 N/A N/A 0.114±0.00 N/A 0.108±0.10 0.096±0.06 0.177±0.04 0.095±0.03
ENSMUST00000150245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079435 ENSMUST00000113211 95.947±25.88 6.792±0.69 651.735±33.96 242.993±75.18 80.056±33.93 77.789±32.69 59.326±2.44 107.374±19.20 506.851±503.94 75.499±13.66 125.369±11.13 230.067±244.01 430.096±186.13 17.053±2.35
ENSMUST00000149857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172023 10.780±0.43 1.647±0.48 N/A N/A 3.793±0.00 4.823±0.55 N/A N/A 3.376±0.00 N/A N/A 8.393±1.60 N/A N/A
ENSMUSG00000083687 ENSMUST00000117590 0.446±0.19 N/A 0.041±0.00 N/A 0.274±0.00 N/A N/A N/A 0.221±0.15 0.278±0.00 0.151±0.00 0.252±0.15 0.052±0.03 N/A

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