C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIA, 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242441 GTF2A1L 9606 + 2:48617798-48733148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000403751 GTF2A1L-001 48617838-48679607 protein_coding
  ENST00000423675 GTF2A1L-003 48617848-48646598 nonsense_mediated_decay
  ENST00000430487 GTF2A1L-201 48617798-48679605 protein_coding
  ENST00000437125 GTF2A1L-006 48617798-48647042 protein_coding
  ENST00000448460 GTF2A1L-004 48617798-48646660 protein_coding
  ENST00000468326 GTF2A1L-002 48617856-48646553 processed_transcript
  ENST00000508440 GTF2A1L-007 48669797-48733148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000403751ENST00000430487
Transcript ID Testis
ENST00000403751 20.646±10.28
ENST00000430487 27.232±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LN CIL_0003LN_0001 CGP 2:48529925-48776517
CIL_0003LM CIL_0003LM_0001 CGP 2:48617798-48755724

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005672 IEA transcription factor TFIIA complex
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0050890 IMP cognition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024154 Gtf2a1l general transcription factor IIA, 1-like protein_coding Mus_musculus

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