C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000242441-ENSG00000279956 CGP 9606 2:48617798-48755724
GeneTranscriptPositionBiotype
ENSG00000138039 (LHCGR)
luteinizing hormone/choriogonadotropin receptor 		ENST00000294954 (LHCGR-001) 48686775-48755693 protein_coding
ENST00000401907 (LHCGR-006) 48687669-48755730 protein_coding
ENST00000403273 (LHCGR-004) 48687669-48755730 protein_coding
ENST00000405626 (LHCGR-003) 48687643-48755671 protein_coding
ENST00000428232 (LHCGR-007) 48720040-48755569 protein_coding
ENST00000477576 (LHCGR-008) 48708770-48723514 processed_transcript
ENSG00000242441 (GTF2A1L)
general transcription factor IIA, 1-like 		ENST00000403751 (GTF2A1L-001) 48617838-48679607 protein_coding
ENST00000423675 (GTF2A1L-003) 48617848-48646598 nonsense_mediated_decay
ENST00000430487 (GTF2A1L-201) 48617798-48679605 protein_coding
ENST00000437125 (GTF2A1L-006) 48617798-48647042 protein_coding
ENST00000448460 (GTF2A1L-004) 48617798-48646660 protein_coding
ENST00000468326 (GTF2A1L-002) 48617856-48646553 processed_transcript
ENST00000508440 (GTF2A1L-007) 48669797-48733148 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003LM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024154-ENSMUSG00000024107 CGP 10090 17:88668660-88791976
GeneTranscriptPositionBiotype
ENSMUSG00000024107 (Lhcgr)
luteinizing hormone/choriogonadotropin receptor 		ENSMUST00000024916 (Lhcgr-201) 88741549-88791976 protein_coding
ENSMUSG00000024154 (Gtf2a1l)
general transcription factor IIA, 1-like 		ENSMUST00000024970 (Gtf2a1l-001) 88668660-88715152 protein_coding
ENSMUST00000161481 (Gtf2a1l-002) 88668696-88694586 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LM_0001ENSG00000138039ENST00000294954ENST00000401907ENST00000403273ENST00000405626ENST00000428232ENST00000477576ENSG00000242441ENST00000403751ENST00000423675ENST00000430487ENST00000437125ENST00000448460ENST00000468326ENST00000508440CIL_0003LM_0002ENSMUSG00000024107ENSMUST00000024916ENSMUSG00000024154ENSMUST00000024970ENSMUST00000161481
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LM_0001ENSG00000138039ENST00000294954ENSG00000242441ENST00000403751ENST00000430487CIL_0003LM_0002ENSMUSG00000024107ENSMUST00000024916ENSMUSG00000024154ENSMUST00000024970ENSMUST00000161481
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138039 ENST00000294954 N/A N/A N/A N/A 1.855±0.00 N/A N/A N/A N/A N/A N/A 5.660±0.00 N/A N/A
ENST00000401907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242441 ENST00000403751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.646±10.28
ENST00000423675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.232±0.00
ENST00000437125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024107 ENSMUST00000024916 0.106±0.02 0.177±0.09 0.006±0.00 0.100±0.06 0.081±0.04 N/A 0.011±0.00 0.017±0.01 0.003±0.00 0.087±0.01 0.017±0.00 60.838±36.63 0.005±0.00 0.677±0.22
ENSMUSG00000024154 ENSMUST00000024970 0.039±0.00 N/A 0.014±0.00 0.063±0.02 0.043±0.01 0.069±0.05 0.060±0.04 0.049±0.03 0.018±0.00 0.024±0.00 N/A 0.763±0.30 0.058±0.02 142.393±39.38
ENSMUST00000161481 0.158±0.00 N/A N/A 0.418±0.00 0.040±0.00 0.070±0.00 0.026±0.00 N/A 0.009±0.00 N/A N/A 0.250±0.01 0.258±0.14 N/A

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